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Mfsd4a Gene Detail
Summary
  • Symbol
    Mfsd4a
  • Name
    major facilitator superfamily domain containing 4A
  • Synonyms
    A930031D07Rik, Mfsd4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442786
    NCBI Gene: 213006
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:132022806-132068062 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 57.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    277 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442786
protein coding gene Chr1:132022806-132068062 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016465
protein coding gene Chr1:135485239-135531747 (-)
A/J MGP_AJ_G0016448
protein coding gene Chr1:130464800-130510008 (-)
AKR/J MGP_AKRJ_G0016413
protein coding gene Chr1:134296791-134342085 (-)
BALB/cJ MGP_BALBcJ_G0016408
protein coding gene Chr1:130785488-130833056 (-)
C3H/HeJ MGP_C3HHeJ_G0016234
protein coding gene Chr1:134444857-134492965 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016869
protein coding gene Chr1:140522469-140569104 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014580
protein coding gene Chr1:123608587-123654077 (-)
CAST/EiJ MGP_CASTEiJ_G0015814
protein coding gene Chr1:133443771-133492670 (-)
CBA/J MGP_CBAJ_G0016206
protein coding gene Chr1:145304000-145352180 (-)
DBA/2J MGP_DBA2J_G0016313
protein coding gene Chr1:129429378-129474904 (-)
FVB/NJ MGP_FVBNJ_G0016312
protein coding gene Chr1:128052212-128097899 (-)
LP/J MGP_LPJ_G0016384
protein coding gene Chr1:136792254-136838163 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016337
protein coding gene Chr1:151097048-151148777 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016905
protein coding gene Chr1:134058592-134104206 (-)
PWK/PhJ MGP_PWKPhJ_G0015600
protein coding gene Chr1:128403985-128451560 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015387
protein coding gene Chr1:133000520-133047098 (-)
WSB/EiJ MGP_WSBEiJ_G0015876
protein coding gene Chr1:134043855-134090449 (-)



Homology
more
  • Human Ortholog
    MFSD4A, major facilitator superfamily domain containing 4A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MFSD4A, major facilitator superfamily domain containing 4A
    Orthology source: HGNC, HomoloGene
  • Synonyms
    MFSD4, UNQ3064
  • Links
    NCBI Gene ID: 148808
    neXtProt AC: NX_Q8N468
    UniProt: Q8N468

  • Chr Location
    1q32.1; chr1:205568984-205602918 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 45419
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MFSD4A
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 213006 NCBI Gene Model | MGI Sequence Detail 45257 C57BL/6J ±  kb
transcript NM_001114662 RefSeq | MGI Sequence Detail 3842 C57BL/6  
polypeptide Q6PDC8 UniProt | EBI | MGI Sequence Detail 510 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 39
    cDNA 39

    Microarray probesets 7
Other
Accession IDs
less
MGI:2138352
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory