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Glt1d1 Gene Detail
Summary
  • Symbol
    Glt1d1
  • Name
    glycosyltransferase 1 domain containing 1
  • Synonyms
    5730455A04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442755
    NCBI Gene: 319804
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:127632130-127708750 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 66.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    774 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442755
protein coding gene Chr5:127632130-127709374 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030117
protein coding gene Chr5:131587070-131680565 (+)
A/J MGP_AJ_G0030084
protein coding gene Chr5:126076586-126166167 (+)
AKR/J MGP_AKRJ_G0030018
protein coding gene Chr5:130174624-130262673 (+)
BALB/cJ MGP_BALBcJ_G0030094
protein coding gene Chr5:127418391-127506921 (+)
C3H/HeJ MGP_C3HHeJ_G0029811
protein coding gene Chr5:130753437-130836419 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030547
protein coding gene Chr5:136647827-136750574 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027772
protein coding gene Chr5:120526366-120604508 (+)
CAST/EiJ MGP_CASTEiJ_G0029220
protein coding gene Chr5:129960880-130056501 (+)
CBA/J MGP_CBAJ_G0029781
protein coding gene Chr5:142001488-142104301 (+)
DBA/2J MGP_DBA2J_G0029931
protein coding gene Chr5:126073769-126153679 (+)
FVB/NJ MGP_FVBNJ_G0029887
protein coding gene Chr5:125123341-125204912 (+)
LP/J MGP_LPJ_G0030020
protein coding gene Chr5:132114192-132200745 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029918
protein coding gene Chr5:145437095-145530055 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030588
protein coding gene Chr5:129825569-129915971 (+)
PWK/PhJ MGP_PWKPhJ_G0028934
protein coding gene Chr5:124943303-125029019 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028771
protein coding gene Chr5:127378806-127471446 (+)
WSB/EiJ MGP_WSBEiJ_G0029294
protein coding gene Chr5:130490882-130574144 (+)



Homology
more
  • Human Ortholog
    GLT1D1, glycosyltransferase 1 domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GLT1D1, glycosyltransferase 1 domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 144423
    neXtProt AC: NX_Q96MS3
    UniProt: Q96MS3

  • Chr Location
    12q24.33; chr12:128853323-128984964 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 16965
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: GLT1D1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319804 NCBI Gene Model | MGI Sequence Detail 76621 C57BL/6J ±  kb
transcript NM_177005 RefSeq | MGI Sequence Detail 1559 C57BL/6  
polypeptide A4FUP9 UniProt | EBI | MGI Sequence Detail 346 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Gene Ontology 2
    Phenotypes 12
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory