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Pheta1 Gene Detail
Summary
  • Symbol
    Pheta1
  • Name
    PH domain containing endocytic trafficking adaptor 1
  • Synonyms
    A230106M15Rik, Fam109a, Ses1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442708
    NCBI Gene: 231717
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:121849001-121854606 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 62.01 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442708
protein coding gene Chr5:121848984-121854632 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030039
protein coding gene Chr5:125425922-125431570 (+)
A/J MGP_AJ_G0030004
protein coding gene Chr5:120262595-120268243 (+)
AKR/J MGP_AKRJ_G0029940
protein coding gene Chr5:124128929-124134577 (+)
BALB/cJ MGP_BALBcJ_G0030015
protein coding gene Chr5:121600416-121606064 (+)
C3H/HeJ MGP_C3HHeJ_G0029732
protein coding gene Chr5:124713331-124718979 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030468
protein coding gene Chr5:130206455-130212103 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027694
protein coding gene Chr5:114878757-114884783 (+)
CAST/EiJ MGP_CASTEiJ_G0029141
protein coding gene Chr5:123813201-123818849 (+)
CBA/J MGP_CBAJ_G0029702
protein coding gene Chr5:135327963-135333611 (+)
DBA/2J MGP_DBA2J_G0029852
protein coding gene Chr5:120312443-120318091 (+)
FVB/NJ MGP_FVBNJ_G0029808
protein coding gene Chr5:119276743-119282391 (+)
LP/J MGP_LPJ_G0029941
protein coding gene Chr5:125964338-125969986 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029839
protein coding gene Chr5:139144281-139149929 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030509
protein coding gene Chr5:123676791-123682439 (+)
PWK/PhJ MGP_PWKPhJ_G0028855
protein coding gene Chr5:119061802-119067440 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028692
protein coding gene Chr5:121406247-121411926 (+)
WSB/EiJ MGP_WSBEiJ_G0029216
protein coding gene Chr5:124348646-124354294 (+)



Homology
more
  • Human Ortholog
    PHETA1, PH domain containing endocytic trafficking adaptor 1
  • Vertebrate Orthologs
    12
  • Human Ortholog
    PHETA1, PH domain containing endocytic trafficking adaptor 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FAM109A, IPIP27A, SES1
  • Links
    NCBI Gene ID: 144717
    neXtProt AC: NX_Q8N4B1
    UniProt: Q8N4B1

  • Chr Location
    12q24.12; chr12:111360651-111369121 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 16966
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;2 chicken;1 zebrafish;2 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: PHETA1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Pheta1
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 231717 NCBI Gene Model | MGI Sequence Detail 5606 C57BL/6J ±  kb
transcript NM_175474 RefSeq | MGI Sequence Detail 2386 Not Specified  
polypeptide Q8BH49 UniProt | EBI | MGI Sequence Detail 266 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 4
Other
Accession IDs
less
MGI:2141035
References
more
  • Summaries
    All 31
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory