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C130050O18Rik Gene Detail
Summary
  • Symbol
    C130050O18Rik
  • Name
    RIKEN cDNA C130050O18 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442694
    NCBI Gene: 319772
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:139405280-139415623 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 78.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    151 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442694
protein coding gene Chr5:139405129-139416092 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030284
protein coding gene Chr5:144383229-144393596 (+)
A/J MGP_AJ_G0030253
protein coding gene Chr5:138264206-138275273 (+)
AKR/J MGP_AKRJ_G0030185
protein coding gene Chr5:142569493-142579850 (+)
BALB/cJ MGP_BALBcJ_G0030270
protein coding gene Chr5:139509359-139519713 (+)
C3H/HeJ MGP_C3HHeJ_G0029981
protein coding gene Chr5:143347747-143358121 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030715
protein coding gene Chr5:149701172-149711510 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027933
protein coding gene Chr5:132126240-132136454 (+)
CAST/EiJ MGP_CASTEiJ_G0029386
protein coding gene Chr5:142762392-142774166 (+)
CBA/J MGP_CBAJ_G0029951
protein coding gene Chr5:155876161-155886517 (+)
DBA/2J MGP_DBA2J_G0030101
protein coding gene Chr5:138073005-138083737 (+)
FVB/NJ MGP_FVBNJ_G0030056
protein coding gene Chr5:137183887-137194232 (+)
LP/J MGP_LPJ_G0030187
protein coding gene Chr5:144994839-145005184 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030087
protein coding gene Chr5:158544207-158554558 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030755
protein coding gene Chr5:142386186-142398182 (+)
PWK/PhJ MGP_PWKPhJ_G0029101
protein coding gene Chr5:137077765-137088232 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028937
protein coding gene Chr5:140074017-140084239 (+)
WSB/EiJ MGP_WSBEiJ_G0029460
protein coding gene Chr5:143150983-143161344 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044092 Ensembl Gene Model | MGI Sequence Detail 10344 C57BL/6J ±  kb
transcript ENSMUST00000163940 Ensembl | MGI Sequence Detail 1618 Not Applicable  
polypeptide ENSMUSP00000127769 Ensembl | MGI Sequence Detail 356 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:182258 Taher L, et al., Global gene expression analysis of murine limb development. PLoS One. 2011;6(12):e28358

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory