About   Help   FAQ
C130050O18Rik Gene Detail
Summary
  • Symbol
    C130050O18Rik
  • Name
    RIKEN cDNA C130050O18 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442694
    NCBI Gene: 319772
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:139391035-139401378 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 78.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442694
 protein coding gene Chr5:139390467-139401847 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030284
 protein coding gene Chr5:144383229-144393596 (+)
A/J MGP_AJ_G0030253
 protein coding gene Chr5:138264206-138275273 (+)
AKR/J MGP_AKRJ_G0030185
 protein coding gene Chr5:142569493-142579850 (+)
BALB/cJ MGP_BALBcJ_G0030270
 protein coding gene Chr5:139509359-139519713 (+)
C3H/HeJ MGP_C3HHeJ_G0029981
 protein coding gene Chr5:143347747-143358121 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030715
 protein coding gene Chr5:149701172-149711510 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027933
 protein coding gene Chr5:132126240-132136454 (+)
CAST/EiJ MGP_CASTEiJ_G0029386
 protein coding gene Chr5:142762392-142774166 (+)
CBA/J MGP_CBAJ_G0029951
 protein coding gene Chr5:155876161-155886517 (+)
DBA/2J MGP_DBA2J_G0030101
 protein coding gene Chr5:138073005-138083737 (+)
FVB/NJ MGP_FVBNJ_G0030056
 protein coding gene Chr5:137183887-137194232 (+)
LP/J MGP_LPJ_G0030187
 protein coding gene Chr5:144994839-145005184 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030087
 protein coding gene Chr5:158544207-158554558 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030755
 protein coding gene Chr5:142386186-142398182 (+)
PWK/PhJ MGP_PWKPhJ_G0029101
 protein coding gene Chr5:137077765-137088232 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028937
 protein coding gene Chr5:140074017-140084239 (+)
WSB/EiJ MGP_WSBEiJ_G0029460
 protein coding gene Chr5:143150983-143161344 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044092 Ensembl Gene Model | MGI Sequence Detail 10344 C57BL/6J ±  kb
transcript ENSMUST00000163940 Ensembl | MGI Sequence Detail 1618 Not Applicable  
polypeptide ENSMUSP00000127769 Ensembl | MGI Sequence Detail 356 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:182258 Taher L, et al., Global gene expression analysis of murine limb development. PLoS One. 2011;6(12):e28358
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory