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Sertm2 Gene Detail
Summary
  • Symbol
    Sertm2
  • Name
    serine rich and transmembrane domain containing 2
  • Synonyms
    A730046J19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442684
    NCBI Gene: 319764
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:142936691-142949270 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 65.23 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    49 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442684
 protein coding gene ChrX:142936691-142949270 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007567
 lincRNA gene ChrX:141704736-141717319 (+)
A/J MGP_AJ_G0007566
 lincRNA gene ChrX:141015831-141029430 (+)
AKR/J MGP_AKRJ_G0007536
 lincRNA gene ChrX:145595074-145607645 (+)
BALB/cJ MGP_BALBcJ_G0007540
 lincRNA gene ChrX:139270878-139283460 (+)
C3H/HeJ MGP_C3HHeJ_G0007487
 lincRNA gene ChrX:141788398-141800975 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007713
 lincRNA gene ChrX:145708349-145720916 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006889
 lincRNA gene ChrX:132612753-132626121 (+)
CAST/EiJ MGP_CASTEiJ_G0007389
 lincRNA gene ChrX:122449162-122461844 (+)
CBA/J MGP_CBAJ_G0007468
 lincRNA gene ChrX:150211092-150223669 (+)
DBA/2J MGP_DBA2J_G0007493
 lincRNA gene ChrX:140117947-140130522 (+)
FVB/NJ MGP_FVBNJ_G0007509
 lincRNA gene ChrX:139325044-139337603 (+)
LP/J MGP_LPJ_G0007573
 lincRNA gene ChrX:142635503-142648087 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007488
 lincRNA gene ChrX:157961062-157973834 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007716
 lincRNA gene ChrX:140982576-140995162 (+)
PWK/PhJ MGP_PWKPhJ_G0007326
 lincRNA gene ChrX:119253971-119266662 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007230
 lincRNA gene ChrX:122987825-123000403 (+)
WSB/EiJ MGP_WSBEiJ_G0007450
 lincRNA gene ChrX:139357672-139370251 (+)



Homology
more
  • Human Ortholog
    SERTM2, serine rich and transmembrane domain containing 2
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SERTM2, serine rich and transmembrane domain containing 2
  • Synonyms
    DKFZp686D0853, LINC00890
  • Links
    NCBI Gene ID: 401613
    UniProt: A0A1B0GWG4

  • Chr Location
    Xq23; chrX:111511645-111522399 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319764 NCBI Gene Model | MGI Sequence Detail 12580 C57BL/6J ±  kb
transcript NM_001354493 RefSeq | MGI Sequence Detail 4724 C57BL/6  
polypeptide A0A1B0GSN8 UniProt | EBI | MGI Sequence Detail 89 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000059670 serine-rich and transmembrane domain-containing 2
    (term hierarchy)
  • InterPro Domains
    IPR031741 Serine-rich and transmembrane domain-containing protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 12
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory