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Rabl6 Gene Detail
Summary
  • Symbol
    Rabl6
  • Name
    RAB, member RAS oncogene family-like 6
  • Synonyms
    B230208H17Rik, Rbel1, Rbel1a, Rbel1b
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442633
    NCBI Gene: 227624
  • Gene Overview
    MyGene.info: RABL6
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25583018-25608488 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 17.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442633
protein coding gene Chr2:25583018-25608521 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025458
protein coding gene Chr2:23485826-23517500 (-)
A/J MGP_AJ_G0025435
protein coding gene Chr2:22571428-22598034 (-)
AKR/J MGP_AKRJ_G0025405
protein coding gene Chr2:23340144-23365654 (-)
BALB/cJ MGP_BALBcJ_G0025431
protein coding gene Chr2:22692238-22717915 (-)
C3H/HeJ MGP_C3HHeJ_G0025192
protein coding gene Chr2:23270842-23298677 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025875
protein coding gene Chr2:24224481-24255136 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023286
protein coding gene Chr2:21482190-21507416 (-)
CAST/EiJ MGP_CASTEiJ_G0024655
protein coding gene Chr2:23137807-23164965 (-)
CBA/J MGP_CBAJ_G0025170
protein coding gene Chr2:25065111-25093283 (-)
DBA/2J MGP_DBA2J_G0025303
protein coding gene Chr2:22412509-22444939 (-)
FVB/NJ MGP_FVBNJ_G0025265
protein coding gene Chr2:22165233-22192351 (-)
LP/J MGP_LPJ_G0025389
protein coding gene Chr2:23423324-23450082 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025296
protein coding gene Chr2:25258109-25285984 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025934
protein coding gene Chr2:23280971-23313691 (-)
PWK/PhJ MGP_PWKPhJ_G0024403
protein coding gene Chr2:22233302-22258971 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024203
protein coding gene Chr2:23424285-23451092 (-)
WSB/EiJ MGP_WSBEiJ_G0024724
protein coding gene Chr2:23351221-23378883 (-)



Homology
more
  • Human Ortholog
    RABL6, RAB, member RAS oncogene family like 6
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RABL6, RAB, member RAS oncogene family like 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C9orf86, PARF, pp8875, RBEL1
  • Links
    NCBI Gene ID: 55684
    neXtProt AC: NX_Q3YEC7
    UniProt: Q3YEC7

  • Chr Location
    9q34.3; chr9:136807922-136841187 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 227624 NCBI Gene Model | MGI Sequence Detail 25471 C57BL/6J ±  kb
transcript NM_001024616 RefSeq | MGI Sequence Detail 3191 C57BL/6  
polypeptide Q5U3K5 UniProt | EBI | MGI Sequence Detail 725 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory