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Simc1 Gene Detail
Summary
  • Symbol
    Simc1
  • Name
    SUMO-interacting motifs containing 1
  • Synonyms
    4732471D19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442599
    NCBI Gene: 319719
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:54503779-54551290 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 28.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442599
protein coding gene Chr13:54503739-54551290 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020569
protein coding gene Chr13:53905329-53952567 (+)
A/J MGP_AJ_G0020523
protein coding gene Chr13:51930789-51976543 (+)
AKR/J MGP_AKRJ_G0020501
protein coding gene Chr13:53457633-53503918 (+)
BALB/cJ MGP_BALBcJ_G0020519
protein coding gene Chr13:52159156-52204903 (+)
C3H/HeJ MGP_C3HHeJ_G0020318
protein coding gene Chr13:53278844-53327575 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020953
protein coding gene Chr13:55556989-55608783 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018535
protein coding gene Chr13:49926411-49970522 (+)
CAST/EiJ MGP_CASTEiJ_G0019832
protein coding gene Chr13:53352171-53406076 (+)
CBA/J MGP_CBAJ_G0020278
protein coding gene Chr13:57662243-57717951 (+)
DBA/2J MGP_DBA2J_G0020401
protein coding gene Chr13:51497127-51544659 (+)
FVB/NJ MGP_FVBNJ_G0020380
protein coding gene Chr13:50945750-50991648 (+)
LP/J MGP_LPJ_G0020477
protein coding gene Chr13:54179297-54228114 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020409
protein coding gene Chr13:57162284-57218483 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020996
protein coding gene Chr13:53048560-53096535 (+)
PWK/PhJ MGP_PWKPhJ_G0019588
protein coding gene Chr13:51475574-51528689 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019415
protein coding gene Chr13:51956672-52008269 (+)
WSB/EiJ MGP_WSBEiJ_G0019894
protein coding gene Chr13:53380710-53429870 (+)



Homology
more
  • Human Ortholog
    SIMC1, SUMO interacting motifs containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SIMC1, SUMO interacting motifs containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf25, OOMA1, PLEIAD
  • Links
    NCBI Gene ID: 375484
    neXtProt AC: NX_Q8NDZ2
    UniProt: Q8NDZ2

  • Chr Location
    5q35.2; chr5:176238359-176345991 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043183 Ensembl Gene Model | MGI Sequence Detail 47512 C57BL/6J ±  kb
transcript ENSMUST00000121401 Ensembl | MGI Sequence Detail 4819 Not Applicable  
polypeptide ENSMUSP00000113676 Ensembl | MGI Sequence Detail 1354 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    10 Sequences
Molecular
Reagents
less
  • All nucleic 69
    cDNA 69

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Diseases 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory