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Simc1 Gene Detail
Summary
  • Symbol
    Simc1
  • Name
    SUMO-interacting motifs containing 1
  • Synonyms
    4732471D19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442599
    NCBI Gene: 319719
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:54503779-54551290 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 28.74 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442599
protein coding gene Chr13:54503739-54551290 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020569
protein coding gene Chr13:53905329-53952567 (+)
A/J MGP_AJ_G0020523
protein coding gene Chr13:51930789-51976543 (+)
AKR/J MGP_AKRJ_G0020501
protein coding gene Chr13:53457633-53503918 (+)
BALB/cJ MGP_BALBcJ_G0020519
protein coding gene Chr13:52159156-52204903 (+)
C3H/HeJ MGP_C3HHeJ_G0020318
protein coding gene Chr13:53278844-53327575 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020953
protein coding gene Chr13:55556989-55608783 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018535
protein coding gene Chr13:49926411-49970522 (+)
CAST/EiJ MGP_CASTEiJ_G0019832
protein coding gene Chr13:53352171-53406076 (+)
CBA/J MGP_CBAJ_G0020278
protein coding gene Chr13:57662243-57717951 (+)
DBA/2J MGP_DBA2J_G0020401
protein coding gene Chr13:51497127-51544659 (+)
FVB/NJ MGP_FVBNJ_G0020380
protein coding gene Chr13:50945750-50991648 (+)
LP/J MGP_LPJ_G0020477
protein coding gene Chr13:54179297-54228114 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020409
protein coding gene Chr13:57162284-57218483 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020996
protein coding gene Chr13:53048560-53096535 (+)
PWK/PhJ MGP_PWKPhJ_G0019588
protein coding gene Chr13:51475574-51528689 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019415
protein coding gene Chr13:51956672-52008269 (+)
WSB/EiJ MGP_WSBEiJ_G0019894
protein coding gene Chr13:53380710-53429870 (+)



Homology
more
  • Human Ortholog
    SIMC1, SUMO interacting motifs containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SIMC1, SUMO interacting motifs containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf25, OOMA1, PLEIAD
  • Links
    NCBI Gene ID: 375484
    neXtProt AC: NX_Q8NDZ2
    UniProt: Q8NDZ2

  • Chr Location
    5q35.2; chr5:176238359-176345991 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000043183 Ensembl Gene Model | MGI Sequence Detail 47512 C57BL/6J ±  kb
transcript ENSMUST00000121401 Ensembl | MGI Sequence Detail 4819 Not Applicable  
polypeptide ENSMUSP00000113676 Ensembl | MGI Sequence Detail 1354 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    10 Sequences
Molecular
Reagents
less
  • All nucleic 69
    cDNA 69

    Microarray probesets 5
References
more
  • Summaries
    All 29
    Diseases 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory