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6330549D23Rik Pseudogene Detail
Summary
  • Symbol
    6330549D23Rik
  • Name
    RIKEN cDNA 6330549D23 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:2442586
    NCBI Gene: 229613
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:96606662-96629819 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 41.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442586
pseudogene Chr3:96606659-96629820 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039706
pseudogene Chr3:97489883-97515017 (-)
A/J MGP_AJ_G0039704
pseudogene Chr3:94371597-94396312 (-)
AKR/J MGP_AKRJ_G0039630
pseudogene Chr3:96592863-96620712 (-)
BALB/cJ MGP_BALBcJ_G0039674
pseudogene Chr3:94181514-94206190 (-)
C3H/HeJ MGP_C3HHeJ_G0039336
pseudogene Chr3:96903048-96928463 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040235
pseudogene Chr3:101044433-101073443 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038456
pseudogene Chr3:96152732-96181701 (-)
CBA/J MGP_CBAJ_G0039307
pseudogene Chr3:104741080-104769087 (-)
DBA/2J MGP_DBA2J_G0039501
pseudogene Chr3:93702677-93726602 (-)
FVB/NJ MGP_FVBNJ_G0039459
pseudogene Chr3:91712941-91737254 (-)
LP/J MGP_LPJ_G0039540
pseudogene Chr3:98774869-98800077 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039461
pseudogene Chr3:110810435-110864263 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040336
pseudogene Chr3:96210889-96238215 (-)
PWK/PhJ MGP_PWKPhJ_G0038132
pseudogene Chr3:93537341-93561236 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037881
pseudogene Chr3:94513313-94537086 (-)
WSB/EiJ MGP_WSBEiJ_G0038690
pseudogene Chr3:96659756-96683819 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving 6330549D23Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 229613 NCBI Gene Model | MGI Sequence Detail 23158 C57BL/6J ±  kb
transcript NR_003619 RefSeq | MGI Sequence Detail 2828 C57BL/6  
polypeptide Q8CCV6 UniProt | EBI | MGI Sequence Detail 187 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR039841 Integrator complex subunit 14
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Diseases 1
    Phenotypes 8
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory