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Slc25a40 Gene Detail
Summary
  • Symbol
    Slc25a40
  • Name
    solute carrier family 25, member 40
  • Synonyms
    B230315F11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442486
    NCBI Gene: 319653
Location & Maps
more
  • Genetic Map
    Chromosome 5, 3.43 cM
  • Mapping Data
    1 experiment
Homology
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  • Human Ortholog
    SLC25A40, solute carrier family 25 member 40
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC25A40, solute carrier family 25 member 40
    Orthology source: HGNC, HomoloGene
  • Synonyms
    MCFP
  • Links
    NCBI Gene ID: 55972
    neXtProt AC: NX_Q8TBP6

  • Chr Location
    7q21.12; chr7:87833568-87876377 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
  • All Mutations and Alleles
    96
  • Gene trapped
    94
  • Targeted
    2
  • Incidental Mutations
Mice homozygous for a gene-trapped allele are viable and overtly normal in a battery of physiological, metabolic, and behavioral assays.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000054323 VEGA Gene Model | MGI Sequence Detail 31948 C57BL/6J ±  kb
transcript OTTMUST00000134787 VEGA | MGI Sequence Detail 2602 Not Applicable  
polypeptide OTTMUSP00000071448 VEGA | MGI Sequence Detail 337 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    381 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000030213 solute carrier family 25 member 40
  • InterPro Domains
    IPR023395 Mitochondrial carrier domain
    IPR002067 Mitochondrial carrier protein
    IPR018108 Mitochondrial substrate/solute carrier
Molecular
Reagents
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  • All nucleic 41
    cDNA 40
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory