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Rab9b Gene Detail
Summary
  • Symbol
    Rab9b
  • Name
    RAB9B, member RAS oncogene family
  • Synonyms
    9330195C02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442454
    NCBI Gene: 319642
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:136858147-136868556 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 59.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442454
protein coding gene ChrX:136858147-136868755 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036106
protein coding gene ChrX:134269864-134280472 (-)
A/J MGP_AJ_G0036087
protein coding gene ChrX:133668179-133679390 (-)
AKR/J MGP_AKRJ_G0036011
protein coding gene ChrX:137947082-137957690 (-)
BALB/cJ MGP_BALBcJ_G0036076
protein coding gene ChrX:132065833-132076441 (-)
C3H/HeJ MGP_C3HHeJ_G0035785
protein coding gene ChrX:134314570-134325201 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036600
protein coding gene ChrX:138170206-138180814 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033427
protein coding gene ChrX:125620148-125630921 (-)
CAST/EiJ MGP_CASTEiJ_G0035073
protein coding gene ChrX:115105486-115116017 (-)
CBA/J MGP_CBAJ_G0035761
protein coding gene ChrX:142432140-142442852 (-)
DBA/2J MGP_DBA2J_G0035918
protein coding gene ChrX:132973992-132984608 (-)
FVB/NJ MGP_FVBNJ_G0035852
protein coding gene ChrX:132173175-132183768 (-)
LP/J MGP_LPJ_G0036012
protein coding gene ChrX:135243856-135254464 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035888
protein coding gene ChrX:149715030-149732883 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036637
protein coding gene ChrX:133648821-133659424 (-)
PWK/PhJ MGP_PWKPhJ_G0034766
protein coding gene ChrX:112130209-112141045 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034594
protein coding gene ChrX:115727323-115737853 (-)
WSB/EiJ MGP_WSBEiJ_G0035208
protein coding gene ChrX:131962819-131974399 (-)



Homology
more
  • Human Ortholog
    RAB9B, RAB9B, member RAS oncogene family
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RAB9B, RAB9B, member RAS oncogene family
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Rab-9L, RAB9L
  • Links
    NCBI Gene ID: 51209
    neXtProt AC: NX_Q9NP90
    UniProt: Q9NP90

  • Chr Location
    Xq22.2; chrX:103822325-103832282 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319642 NCBI Gene Model | MGI Sequence Detail 10410 C57BL/6J ±  kb
transcript NM_176971 RefSeq | MGI Sequence Detail 3797 C57BL/6  
polypeptide Q8BHH2 UniProt | EBI | MGI Sequence Detail 201 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:233558 Zhang Z, et al., Crystal structure of the Rab9A-RUTBC2 RBD complex reveals the molecular basis for the binding specificity of Rab9A with RUTBC2. Structure. 2014 Oct 7;22(10):1408-20

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/21/2020
MGI 6.14
The Jackson Laboratory