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Rab9b
Gene Detail
Symbol

Name
ID
Rab9b
RAB9B, member RAS oncogene family
MGI:2442454
Synonyms
9330195C02Rik
Feature Type
protein coding gene
Genetic Map
Chromosome X
59.10 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:136858147-136868755 bp, - strand
From VEGA annotation of GRCm38

  10609 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3136  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab9b

Human
homologs
Human Homolog RAB9B, RAB9B, member RAS oncogene family
NCBI Gene ID 51209
neXtProt AC  NX_Q9NP90
Human Synonyms  Rab-9L, RAB9L
Human Chr (Location)  Xq22.1-q22.3; chrX:103822325-103919275 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Interactions
Rab9b interacts with 368 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process GTP catabolic process, intracellular protein transport, ...
Component cytoplasmic vesicle, late endosome, ...
Function GDP binding, GTPase activity, ...
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000018802 (Evidence)
Ensembl Gene ModelENSMUSG00000043463 (Evidence)
Entrez Gene319642 (Evidence)
UniGene44557
DFCITC1629423, TC1587215
DoTSDT.101360794
NIA Mouse Gene IndexU039724
Consensus CDS ProjectCCDS30425.1
International Mouse Knockout Project StatusRab9b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018802 VEGA Gene Model | MGI Sequence Detail 10609 C57BL/6J ±  kb
transcript OTTMUST00000045266 VEGA | MGI Sequence Detail 3980 Not Applicable 
polypeptide OTTMUSP00000020360 VEGA | MGI Sequence Detail 201 Not Applicable 

For the selected sequences
All sequences(23) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(13 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013645 ras-related protein Rab-9B
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory