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Cnpy1 Gene Detail
Summary
  • Symbol
    Cnpy1
  • Name
    canopy FGF signaling regulator 1
  • Synonyms
    1500012D20Rik, 9630008K15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442451
    NCBI Gene: 269637
Location & Maps
more
  • Sequence Map
    Chr5:28200819-28245806 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      44988 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 13.99 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CNPY1, canopy FGF signaling regulator 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CNPY1, canopy FGF signaling regulator 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 285888
    neXtProt AC: NX_Q3B7I2
    UniProt: Q3B7I2

  • Chr Location
    7q36.3; chr7:155501258-155533844 (-)  GRCh38.p7
Human Diseases
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  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    33 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    26
  • Chemically induced (other)
    2
  • Gene trapped
    17
  • Radiation induced
    5
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    8 involving Cnpy1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    16 strains or lines available
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    29
  • Tissues
    9
  • cDNA Data
    9
  • Literature Summary
    5
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029652 VEGA Gene Model | MGI Sequence Detail 44988 C57BL/6J ±  kb
transcript OTTMUST00000073559 VEGA | MGI Sequence Detail 2284 Not Applicable  
polypeptide OTTMUSP00000038099 VEGA | MGI Sequence Detail 173 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    130 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 10
    Primer pair 1
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925577, MGI:2141000
References
more
  • Summaries
    All 59
    Developmental Gene Expression 5
    Diseases 2
    Gene Ontology 1
    Phenotypes 33
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:217498 Anderson E, et al., Mapping the Shh long-range regulatory domain. Development. 2014 Oct;141(20):3934-43
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/16/2017
MGI 6.09 		The Jackson Laboratory