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Cnpy1 Gene Detail
Summary
  • Symbol
    Cnpy1
  • Name
    canopy FGF signaling regulator 1
  • Synonyms
    1500012D20Rik, 9630008K15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442451
    NCBI Gene: 269637
Location & Maps
more
  • Sequence Map
    Chr5:28200819-28245806 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      44988 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 13.99 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CNPY1, canopy FGF signaling regulator 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CNPY1, canopy FGF signaling regulator 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 285888
    neXtProt AC: NX_Q3B7I2

  • Chr Location
    7q36.3; chr7:155501258-155533844 (-)  GRCh38.p2
Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
  • All Mutations and Alleles
    26
  • Chemically induced (other)
    2
  • Gene trapped
    17
  • Radiation induced
    5
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    8 involving Cnpy1
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    23
  • Tissues
    5
  • cDNA Data
    9
  • Literature Summary
    5
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029652 VEGA Gene Model | MGI Sequence Detail 44988 C57BL/6J ±  kb
transcript OTTMUST00000073559 VEGA | MGI Sequence Detail 2284 Not Applicable  
polypeptide OTTMUSP00000038099 VEGA | MGI Sequence Detail 173 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    130 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000005658 protein canopy homolog 1
  • InterPro Domains
    IPR021852 Domain of unknown function DUF3456
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 5
Other
Accession IDs
less
MGI:1925577, MGI:2141000
References
more
  • Summaries
    All 32
    Developmental Gene Expression 5
    Diseases 2
    Gene Ontology 1
    Phenotypes 32
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:217498 Anderson E, et al., Mapping the Shh long-range regulatory domain. Development. 2014 Oct;141(20):3934-43
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory