About   Help   FAQ
Efcab5 Gene Detail
Summary
  • Symbol
    Efcab5
  • Name
    EF-hand calcium binding domain 5
  • Synonyms
    4930563A03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442440
    NCBI Gene: 319634
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:77089915-77188968 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.25 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    233 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442440
protein coding gene Chr11:77089904-77216101 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018744
protein coding gene Chr11:77960414-78096404 (-)
A/J MGP_AJ_G0018710
protein coding gene Chr11:75026604-75157703 (-)
AKR/J MGP_AKRJ_G0018680
protein coding gene Chr11:77312560-77442908 (-)
BALB/cJ MGP_BALBcJ_G0018684
protein coding gene Chr11:75411500-75543864 (-)
C3H/HeJ MGP_C3HHeJ_G0018497
protein coding gene Chr11:77324627-77469263 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019135
protein coding gene Chr11:80417501-80561905 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016770
protein coding gene Chr11:72017829-72117511 (-)
CAST/EiJ MGP_CASTEiJ_G0018051
protein coding gene Chr11:77730741-77867128 (-)
CBA/J MGP_CBAJ_G0018467
protein coding gene Chr11:83915589-84068231 (-)
DBA/2J MGP_DBA2J_G0018576
protein coding gene Chr11:74620505-74749141 (-)
FVB/NJ MGP_FVBNJ_G0018566
protein coding gene Chr11:74183508-74314025 (-)
LP/J MGP_LPJ_G0018647
protein coding gene Chr11:78565077-78693383 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018592
protein coding gene Chr11:84382183-84493182 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019175
protein coding gene Chr11:77518409-77654410 (-)
PWK/PhJ MGP_PWKPhJ_G0017822
protein coding gene Chr11:75365251-75498671 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017613
protein coding gene Chr11:77111799-77222383 (-)
WSB/EiJ MGP_WSBEiJ_G0018104
protein coding gene Chr11:77333295-77470713 (-)



Homology
more
  • Human Ortholog
    EFCAB5, EF-hand calcium binding domain 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    EFCAB5, EF-hand calcium binding domain 5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 374786
    neXtProt AC: NX_A4FU69
    UniProt: A4FU69

  • Chr Location
    17q11.2; chr17:29929856-30108452 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050944 Ensembl Gene Model | MGI Sequence Detail 99054 C57BL/6J ±  kb
transcript ENSMUST00000108400 Ensembl | MGI Sequence Detail 4654 Not Applicable  
polypeptide ENSMUSP00000104037 Ensembl | MGI Sequence Detail 1406 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 27
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/13/2019
MGI 6.14
The Jackson Laboratory