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Dcp1b
Gene Detail
 Symbol
Name
ID
Dcp1b
DCP1 decapping enzyme homolog B (S. cerevisiae)
MGI:2442404
Synonyms B930050E02Rik
Feature Type protein coding gene
Genetic Map
Chromosome 6
56.55 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr6:119175253-119221616 bp, + strand
From VEGA annotation of GRCm38

  46364 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:51881  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: mRNA-decapping enzyme 1
Gene Tree: Dcp1b

Human
homologs
Human Homolog DCP1B, decapping mRNA 1B
NCBI Gene ID 196513
neXtProt AC  NX_Q8IZD4
Human Synonyms  DCP1, hDcp1b
Human Chr (Location)  12p13.33; chr12:1946048-2004545 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(1) Targeted(4)
Incidental mutations (data from APF )
Interactions
Dcp1b interacts with 229 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Component cytoplasm, cytoplasmic mRNA processing body, ...
Function coenzyme F390-A hydrolase activity, coenzyme F390-G hydrolase activity, ...
External Resources: FuncBase
Expression
cDNA source data(40)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(40) cDNA(40)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000024699 (Evidence)
Ensembl Gene ModelENSMUSG00000041477 (Evidence)
Entrez Gene319618 (Evidence)
UniGene250197
DFCITC1582928, TC1601686
DoTSDT.101359881, DT.55146968, DT.55242100, DT.94244814
NIA Mouse Gene IndexU007326
EC3.-.-.-
Consensus CDS ProjectCCDS39610.1
International Mouse Knockout Project StatusDcp1b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024699 VEGA Gene Model | MGI Sequence Detail 46364 C57BL/6J ±  kb
transcript OTTMUST00000060787 VEGA | MGI Sequence Detail 3313 Not Applicable 
polypeptide OTTMUSP00000029698 VEGA | MGI Sequence Detail 578 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(20) UniProt(2)
Polymorphisms SNPs within 2kb(328 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010334 Dcp1-like decapping
InterPro IPR011993 Pleckstrin homology-like domain
Protein Ontology PR:000006318 mRNA-decapping enzyme 1B
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:201967 Lin ST, et al., MicroRNA-23a promotes myelination in the central nervous system. Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17468-73
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory