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Sybu Gene Detail
Summary
  • Symbol
    Sybu
  • Name
    syntabulin (syntaxin-interacting)
  • Synonyms
    5730410E15Rik, A830027B17Rik, Golsyn/Syntabulin
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442392
    NCBI Gene: 319613
  • Gene Overview
    MyGene.info: SYBU
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:44671856-44788063 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 16.91 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    579 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442392
protein coding gene Chr15:44671856-44788074 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021833
protein coding gene Chr15:43293774-43404181 (-)
A/J MGP_AJ_G0021793
protein coding gene Chr15:41643467-41761178 (-)
AKR/J MGP_AKRJ_G0021774
protein coding gene Chr15:42871944-42990142 (-)
BALB/cJ MGP_BALBcJ_G0021800
protein coding gene Chr15:41716058-41833478 (-)
C3H/HeJ MGP_C3HHeJ_G0021574
protein coding gene Chr15:42788286-42910793 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022239
protein coding gene Chr15:44968903-45090231 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019776
protein coding gene Chr15:39165071-39275476 (-)
CAST/EiJ MGP_CASTEiJ_G0021091
protein coding gene Chr15:43308440-43427969 (-)
CBA/J MGP_CBAJ_G0021543
protein coding gene Chr15:46519197-46642453 (-)
DBA/2J MGP_DBA2J_G0021667
protein coding gene Chr15:41453164-41571099 (-)
FVB/NJ MGP_FVBNJ_G0021645
protein coding gene Chr15:40755100-40871409 (-)
LP/J MGP_LPJ_G0021737
protein coding gene Chr15:43057781-43174511 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021669
protein coding gene Chr15:49930646-50074746 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022262
protein coding gene Chr15:43060820-43170517 (-)
PWK/PhJ MGP_PWKPhJ_G0020836
protein coding gene Chr15:41498181-41609929 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020673
protein coding gene Chr15:42737513-42855737 (-)
WSB/EiJ MGP_WSBEiJ_G0021146
protein coding gene Chr15:42954296-43077271 (-)



Homology
more
  • Human Ortholog
    SYBU, syntabulin
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SYBU, syntabulin
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GOLSYN, OCSYN, SNPHL
  • Links
    NCBI Gene ID: 55638
    neXtProt AC: NX_Q9NX95
    UniProt: Q9NX95

  • Chr Location
    8q23.2; chr8:109574176-109691791 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9838
    1 human;1 mouse;1 rat;1 chimpanzee;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SYBU
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022340 Ensembl Gene Model | MGI Sequence Detail 116208 C57BL/6J ±  kb
transcript ENSMUST00000090057 Ensembl | MGI Sequence Detail 3230 Not Applicable  
polypeptide ENSMUSP00000087511 Ensembl | MGI Sequence Detail 793 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2442683
References
more
  • Summaries
    All 30
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:209428 Ragancokova D, et al., TSHZ1-dependent gene regulation is essential for olfactory bulb development and olfaction. J Clin Invest. 2014 Mar 3;124(3):1214-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory