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Zmat1 Gene Detail
Summary
  • Symbol
    Zmat1
  • Name
    zinc finger, matrin type 1
  • Synonyms
    B930008K04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442284
    NCBI Gene: 215693
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:134971372-135009209 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 56.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    111 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442284
protein coding gene ChrX:134971372-135009209 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036080
protein coding gene ChrX:132173602-132213515 (-)
A/J MGP_AJ_G0036059
protein coding gene ChrX:131625825-131664413 (-)
AKR/J MGP_AKRJ_G0035981
protein coding gene ChrX:135826295-135868365 (-)
BALB/cJ MGP_BALBcJ_G0036052
protein coding gene ChrX:130039011-130077090 (-)
C3H/HeJ MGP_C3HHeJ_G0035756
protein coding gene ChrX:132258829-132297251 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036574
protein coding gene ChrX:136062743-136103140 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033403
protein coding gene ChrX:123758044-123797827 (-)
CAST/EiJ MGP_CASTEiJ_G0035044
protein coding gene ChrX:113118768-113158252 (-)
CBA/J MGP_CBAJ_G0035733
protein coding gene ChrX:140172295-140214068 (-)
DBA/2J MGP_DBA2J_G0035888
protein coding gene ChrX:130902266-130940311 (-)
FVB/NJ MGP_FVBNJ_G0035829
protein coding gene ChrX:130231732-130271032 (-)
LP/J MGP_LPJ_G0035981
protein coding gene ChrX:133080889-133126939 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035858
protein coding gene ChrX:147543042-147590182 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036605
protein coding gene ChrX:131613852-131660508 (-)
PWK/PhJ MGP_PWKPhJ_G0034736
protein coding gene ChrX:110059853-110100222 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034567
protein coding gene ChrX:113791836-113834944 (-)
WSB/EiJ MGP_WSBEiJ_G0035182
protein coding gene ChrX:129982606-130026933 (-)



Homology
more
  • Human Ortholog
    ZMAT1, zinc finger matrin-type 1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ZMAT1, zinc finger matrin-type 1
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 84460
    neXtProt AC: NX_Q5H9K5
    UniProt: Q5H9K5

  • Chr Location
    Xq22.1; chrX:101882288-101932135 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 215693 NCBI Gene Model | MGI Sequence Detail 37838 C57BL/6J ±  kb
transcript NM_175446 RefSeq | MGI Sequence Detail 3520 C57BL/6  
polypeptide Q3V0C1 UniProt | EBI | MGI Sequence Detail 714 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 3
Other
Accession IDs
less
MGI:2148031
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:210663 Zhou J, et al., Respiratory failure, cleft palate and epilepsy in the mouse model of human Xq22.1 deletion syndrome. Hum Mol Genet. 2014 Jul 15;23(14):3823-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/11/2018
MGI 6.13
The Jackson Laboratory