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A330041J22Rik Gene Detail
Summary
  • Symbol
    A330041J22Rik
  • Name
    RIKEN cDNA A330041J22 gene
Location &
Maps
more
  • Sequence Map
    Chr9:86695460-86701253 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 46.58 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    67 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442269
lncRNA gene Chr9:86695442-86701253 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004657
antisense lncRNA gene Chr9:87541489-87547272 (+)
A/J MGP_AJ_G0004638
antisense lncRNA gene Chr9:84483590-84489372 (+)
AKR/J MGP_AKRJ_G0004621
antisense lncRNA gene Chr9:86492764-86498531 (+)
BALB/cJ MGP_BALBcJ_G0004622
antisense lncRNA gene Chr9:84126761-84132543 (+)
C3H/HeJ MGP_C3HHeJ_G0004571
antisense lncRNA gene Chr9:86952278-86958060 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004772
antisense lncRNA gene Chr9:89903692-89909480 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004527
antisense lncRNA gene Chr9:87417819-87423566 (+)
CBA/J MGP_CBAJ_G0004565
antisense lncRNA gene Chr9:93069829-93075622 (+)
DBA/2J MGP_DBA2J_G0004580
antisense lncRNA gene Chr9:84042247-84048003 (+)
FVB/NJ MGP_FVBNJ_G0004598
antisense lncRNA gene Chr9:83126625-83132872 (+)
LP/J MGP_LPJ_G0004661
antisense lncRNA gene Chr9:87752800-87758585 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004586
antisense lncRNA gene Chr9:94682108-94687875 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004771
antisense lncRNA gene Chr9:86597580-86603340 (+)
PWK/PhJ MGP_PWKPhJ_G0004481
antisense lncRNA gene Chr9:84209187-84214972 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0004570
antisense lncRNA gene Chr9:86633831-86639603 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087466 Ensembl Gene Model | MGI Sequence Detail 5794 C57BL/6J ±  kb
transcript ENSMUST00000150367 Ensembl | MGI Sequence Detail 1825 Not Applicable  
polypeptide Q8CA76 UniProt | EBI | MGI Sequence Detail 107 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/19/2021
MGI 6.16
The Jackson Laboratory