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N4bp3
Gene Detail
Symbol

Name
ID
N4bp3
NEDD4 binding protein 3
MGI:2442218
Synonyms
C330016O10Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 11
31.19 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:51643063-51650842 bp, - strand
From VEGA annotation of GRCm38

  7780 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17124  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: N4BP3
Gene Tree: N4bp3

Human
homologs
N4BP3, Nedd4 binding protein 3
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 23138
neXtProt AC: NX_O15049

Human Synonyms: LZTS4

Human Chr (Location): 5q35.3; chr5:178113506-178127034 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(47) : Gene trapped(44) Targeted(3)
Incidental mutations (data from APF )
Interactions
N4bp3 interacts with 60 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cytoplasmic vesicle, membrane
Function protein binding
External Resources: FuncBase
Expression
cDNA source data(46)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase n4bp3    NEW 
Molecular
reagents
All nucleic(46) cDNA(46)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000005606 (Evidence)
Ensembl Gene Model ENSMUSG00000001053 (Evidence)
Entrez Gene 212706 (Evidence)
UniGene 41760
DFCI TC1576553
Consensus CDS Project CCDS24657.1
International Mouse Phenotyping Consortium Status N4bp3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005606 VEGA Gene Model | MGI Sequence Detail 7780 C57BL/6J ±  kb
transcript OTTMUST00000012474 VEGA | MGI Sequence Detail 2367 Not Applicable 
polypeptide OTTMUSP00000005772 VEGA | MGI Sequence Detail 537 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(8) UniProt(4)
Polymorphisms
SNPs within 2kb(30 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000010941 NEDD4-binding protein 3
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory