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Camk1d
Gene Detail
Symbol

Name
ID
Camk1d
calcium/calmodulin-dependent protein kinase ID
MGI:2442190
Synonyms
A630059D12Rik, CaMKIdelta, CKLiK, E030025C11Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 2
3.39 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr2:5293457-5714515 bp, - strand
From VEGA annotation of GRCm38

  421059 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:121858  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CAMK1D
Protein SuperFamily: kinase-related transforming protein
Gene Tree: Camk1d

Human
homologs
CAMK1D, calcium/calmodulin-dependent protein kinase ID
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 57118
neXtProt AC: NX_Q8IU85

Human Synonyms: CaM-K1, CaMKID, CKLiK

Human Chr (Location): 10p13; chr10:12349517-12835545 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(32) : Gene trapped(30) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Camk1d interacts with 466 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (27 annotations)
Process inflammatory response, metabolic process, ...
Component cytoplasm, nucleus
Function ATP binding, calmodulin binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (19)    Tissues (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 19
cDNA source data(68)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase camk1d ; ZFIN camk1da, camk1db    NEW 
Molecular
reagents
All nucleic(69) cDNA(69)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000010993 (Evidence)
Ensembl Gene Model ENSMUSG00000039145 (Evidence)
Entrez Gene 227541 (Evidence)
UniGene 191949
DFCI TC1597678, TC1677150, TC1596855, TC1584016, TC1580833
DoTS DT.525097, DT.110719025, DT.101342578, DT.528826, DT.94250581
NIA Mouse Gene Index U022255
EC 2.7.11.17
Consensus CDS Project CCDS15665.1, CCDS70975.1
International Mouse Phenotyping Consortium Status Camk1d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010993 VEGA Gene Model | MGI Sequence Detail 421059 C57BL/6J ±  kb
transcript OTTMUST00000025786 VEGA | MGI Sequence Detail 6962 Not Applicable 
polypeptide OTTMUSP00000011831 VEGA | MGI Sequence Detail 385 Not Applicable 

For the selected sequences
All sequences(77) RefSeq(22) UniProt(5)
Polymorphisms
SNPs within 2kb(2564 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020636 Calcium/calmodulin-dependent/calcium-dependent protein kinase
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
Protein Ontology PR:000004989 calcium/calmodulin-dependent protein kinase type 1D
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:219169 Purohit A, et al., Oxidized Ca(2+)/calmodulin-dependent protein kinase II triggers atrial fibrillation. Circulation. 2013 Oct 15;128(16):1748-57
All references(34)
Other
accession IDs
MGI:2444089

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory