Camk1d
Gene Detail

Symbol Name ID

Camk1d calcium/calmodulin-dependent protein kinase ID MGI:2442190

Synonyms

A630059D12Rik, CaMKIdelta, CKLiK, E030025C11Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 2

3.39 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr2:5293457-5714515 bp, - strand From VEGA annotation of GRCm38   421059 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:121858  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: kinase-related transforming protein
Gene Tree: Camk1d

Human homologs

Human Homolog		CAMK1D, calcium/calmodulin-dependent protein kinase ID
NCBI Gene ID		57118
neXtProt AC		NX_Q8IU85
Human Synonyms		CaM-K1, CaMKID, CKLiK
Human Chr (Location)		10p13; chr10:12391583-12871735 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(32) : Targeted(2) Gene trapped(30)

Gene Ontology (GO) classifications

All GO classifications: (28 annotations)

Process	inflammatory response, metabolic process, ...
Component	cytoplasm, nucleus
Function	ATP binding, calmodulin binding, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (19)    Tissues (13)   
Theiler Stages: 20, 22, 24, 26, 28

Assay Type	Results
RNA in situ	19

cDNA source data(67)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(68) cDNA(68)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000010993 (Evidence)
Ensembl Gene Model	ENSMUSG00000039145 (Evidence)
Entrez Gene	227541 (Evidence)
UniGene	191949
DFCI	TC1580833, TC1584016, TC1596855, TC1597678, TC1677150
DoTS	DT.101342578, DT.110719025, DT.525097, DT.528826, DT.94250581
NIA Mouse Gene Index	U022255
EC	2.7.11.17
Consensus CDS Project	CCDS15665.1
International Mouse Knockout Project Status	Camk1d

Sequences

Length	Strain/Species
genomic	OTTMUSG00000010993	VEGA Gene Model | MGI Sequence Detail	421059	C57BL/6J
transcript	OTTMUST00000025786	VEGA | MGI Sequence Detail	6962	Not Applicable
polypeptide	OTTMUSP00000011831	VEGA | MGI Sequence Detail	385	Not Applicable

All sequences(56) RefSeq(2) UniProt(5)

Polymorphisms

SNPs(1912 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR020636	Calcium/calmodulin-dependent/calcium-dependent protein kinase
InterPro	IPR017441	Protein kinase, ATP binding site
InterPro	IPR000719	Protein kinase, catalytic domain
InterPro	IPR011009	Protein kinase-like domain
InterPro	IPR002290	Serine/threonine- / dual-specificity protein kinase, catalytic domain
InterPro	IPR008271	Serine/threonine-protein kinase, active site
Protein Ontology	PR:000004989	calcium/calmodulin-dependent protein kinase type 1D

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)

Other accession IDs

MGI:2444089