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Camk1d
Gene Detail
 Symbol
Name
ID
Camk1d
calcium/calmodulin-dependent protein kinase ID
MGI:2442190
Synonyms A630059D12Rik, CaMKIdelta, CKLiK, E030025C11Rik
Feature Type protein coding gene
Genetic Map
Chromosome 2
3.39 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr2:5293457-5714515 bp, - strand
From VEGA annotation of GRCm38

  421059 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:121858  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: kinase-related transforming protein
Gene Tree: Camk1d

Human
homologs
Human Homolog CAMK1D, calcium/calmodulin-dependent protein kinase ID
NCBI Gene ID 57118
neXtProt AC  NX_Q8IU85
Human Synonyms  CaM-K1, CaMKID, CKLiK
Human Chr (Location)  10p13; chr10:12349513-12835545 (+)  GRCh38
Alleles
and
phenotypes
All alleles(32) : Gene trapped(30) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (29 annotations)
Process inflammatory response, metabolic process, ...
Component cytoplasm, nucleus
Function ATP binding, calmodulin binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (19)    Tissues (13)   
Theiler Stages: 20, 22, 24, 26, 28
Assay TypeResults
RNA in situ 19
cDNA source data(68)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(69) cDNA(69)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000010993 (Evidence)
Ensembl Gene ModelENSMUSG00000039145 (Evidence)
Entrez Gene227541 (Evidence)
UniGene191949
DFCITC1580833, TC1584016, TC1596855, TC1597678, TC1677150
DoTSDT.101342578, DT.110719025, DT.525097, DT.528826, DT.94250581
NIA Mouse Gene IndexU022255
EC2.7.11.17
Consensus CDS ProjectCCDS15665.1, CCDS70975.1
International Mouse Knockout Project StatusCamk1d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010993 VEGA Gene Model | MGI Sequence Detail 421059 C57BL/6J ±  kb
transcript OTTMUST00000025786 VEGA | MGI Sequence Detail 6962 Not Applicable 
polypeptide OTTMUSP00000011831 VEGA | MGI Sequence Detail 385 Not Applicable 

For the selected sequences
All sequences(74) RefSeq(20) UniProt(5)
Polymorphisms SNPs within 2kb(2564 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020636 Calcium/calmodulin-dependent/calcium-dependent protein kinase
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
Protein Ontology PR:000004989 calcium/calmodulin-dependent protein kinase type 1D
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2444089

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory