About   Help   FAQ
Zc3h12b Gene Detail
Summary
  • Symbol
    Zc3h12b
  • Name
    zinc finger CCCH-type containing 12B
  • Synonyms
    A130028J20Rik, LOC245523
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442133
    NCBI Gene: 547176
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:95711678-95932637 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 42.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    344 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442133
protein coding gene ChrX:95711558-95932656 (.)
129S1/SvImJ MGP_129S1SvImJ_G0035920
protein coding gene ChrX:92052178-92283599 (+)
A/J MGP_AJ_G0035906
protein coding gene ChrX:92267780-92481499 (+)
AKR/J MGP_AKRJ_G0035822
protein coding gene ChrX:94684774-94920362 (+)
BALB/cJ MGP_BALBcJ_G0035890
protein coding gene ChrX:91002379-91205576 (+)
C3H/HeJ MGP_C3HHeJ_G0035598
protein coding gene ChrX:92575199-92778202 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036419
protein coding gene ChrX:94987506-95217622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033247
protein coding gene ChrX:90302880-90485748 (+)
CAST/EiJ MGP_CASTEiJ_G0034884
protein coding gene ChrX:77095184-77285745 (+)
CBA/J MGP_CBAJ_G0035573
protein coding gene ChrX:97782604-98054945 (+)
DBA/2J MGP_DBA2J_G0035728
protein coding gene ChrX:91430071-91671925 (+)
FVB/NJ MGP_FVBNJ_G0035666
protein coding gene ChrX:90865186-91075856 (+)
LP/J MGP_LPJ_G0035818
protein coding gene ChrX:93069257-93304158 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035701
protein coding gene ChrX:102118643-102356293 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036446
protein coding gene ChrX:91800498-92023482 (+)
PWK/PhJ MGP_PWKPhJ_G0034584
protein coding gene ChrX:74745778-74954140 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034413
protein coding gene ChrX:77867018-78098826 (+)
WSB/EiJ MGP_WSBEiJ_G0035024
protein coding gene ChrX:90656067-90864230 (+)



Homology
more
  • Human Ortholog
    ZC3H12B, zinc finger CCCH-type containing 12B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZC3H12B, zinc finger CCCH-type containing 12B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CXorf32, MCPIP2
  • Links
    NCBI Gene ID: 340554
    neXtProt AC: NX_Q5HYM0
    UniProt: Q5HYM0

  • Chr Location
    Xq11.2-q12; chrX:65034815-65507887 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035045 Ensembl Gene Model | MGI Sequence Detail 220960 C57BL/6J ±  kb
transcript ENSMUST00000082183 Ensembl | MGI Sequence Detail 2831 Not Applicable  
polypeptide ENSMUSP00000080820 Ensembl | MGI Sequence Detail 835 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR021869 Ribonuclease Zc3h12a-like, NYN domain
    IPR000571 Zinc finger, CCCH-type
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:2685219
References
more
  • Summaries
    All 19
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory