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Insyn1 Gene Detail
Summary
  • Symbol
    Insyn1
  • Name
    inhibitory synaptic factor 1
  • Synonyms
    6030419C18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442108
    NCBI Gene: 319477
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:58395886-58407063 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 9, 31.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442108
protein coding gene Chr9:58395886-58407063 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034891
protein coding gene Chr9:57783717-57795911 (+)
A/J MGP_AJ_G0034872
protein coding gene Chr9:55907888-55918997 (+)
AKR/J MGP_AKRJ_G0034801
protein coding gene Chr9:57205289-57216398 (+)
BALB/cJ MGP_BALBcJ_G0034864
protein coding gene Chr9:55679691-55690805 (+)
C3H/HeJ MGP_C3HHeJ_G0034574
protein coding gene Chr9:57689407-57700494 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035383
protein coding gene Chr9:59395324-59406466 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032294
protein coding gene Chr9:55180767-55191838 (+)
CAST/EiJ MGP_CASTEiJ_G0033895
protein coding gene Chr9:57781402-57793719 (+)
CBA/J MGP_CBAJ_G0034545
protein coding gene Chr9:61484096-61497199 (+)
DBA/2J MGP_DBA2J_G0034704
protein coding gene Chr9:55758227-55769356 (+)
FVB/NJ MGP_FVBNJ_G0034646
protein coding gene Chr9:55000353-55011462 (+)
LP/J MGP_LPJ_G0034787
protein coding gene Chr9:58064842-58075949 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034689
protein coding gene Chr9:62923959-62935076 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035405
protein coding gene Chr9:57216544-57227641 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0033434
protein coding gene Chr9:57504567-57515692 (+)
WSB/EiJ MGP_WSBEiJ_G0034008
protein coding gene Chr9:57171598-57183547 (+)



Homology
more
  • Human Ortholog
    INSYN1, inhibitory synaptic factor 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    INSYN1, inhibitory synaptic factor 1
  • Synonyms
    C15orf59
  • Links
    NCBI Gene ID: 388135
    neXtProt AC: NX_Q2T9L4
    UniProt: Q2T9L4

  • Chr Location
    15q24.1; chr15:73735458-73753351 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit elevated neuronal firing patterns in the hippocampus and deficits in fear conditioning memory.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 319477 NCBI Gene Model | MGI Sequence Detail 11178 C57BL/6J ±  kb
    transcript NM_176921 RefSeq | MGI Sequence Detail 2177 C57BL/6  
    polypeptide Q8CD60 UniProt | EBI | MGI Sequence Detail 292 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 6
      Genomic 1
      cDNA 5

      Microarray probesets 2
    References
    more
    • Summaries
      All 22
      Gene Ontology 3
      Phenotypes 5
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:284536 Uezu A, et al., Essential role for InSyn1 in dystroglycan complex integrity and cognitive behaviors in mice. Elife. 2019 Dec 12;8:e50712

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    03/19/2024
    MGI 6.23
    The Jackson Laboratory