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Pld5 Gene Detail
Summary
  • Symbol
    Pld5
  • Name
    phospholipase D family, member 5
  • Synonyms
    B230365F16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442056
    NCBI Gene: 319455
  • Gene Overview
    MyGene.info: PLD5
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:175962306-176275312 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 81.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3709 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442056
protein coding gene Chr1:175962301-176276850 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016843
protein coding gene Chr1:182061612-182410043 (-)
A/J MGP_AJ_G0016822
protein coding gene Chr1:174732707-175061428 (-)
AKR/J MGP_AKRJ_G0016788
protein coding gene Chr1:179967111-180303184 (-)
BALB/cJ MGP_BALBcJ_G0016780
protein coding gene Chr1:175266078-175590518 (-)
C3H/HeJ MGP_C3HHeJ_G0016605
protein coding gene Chr1:180558010-180891866 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017245
protein coding gene Chr1:188074788-188419583 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014950
protein coding gene Chr1:166050055-166373974 (-)
CAST/EiJ MGP_CASTEiJ_G0016186
protein coding gene Chr1:179933558-180263970 (-)
CBA/J MGP_CBAJ_G0016579
protein coding gene Chr1:194909158-195272819 (-)
DBA/2J MGP_DBA2J_G0016684
protein coding gene Chr1:173588967-173911215 (-)
FVB/NJ MGP_FVBNJ_G0016681
protein coding gene Chr1:171707845-172027255 (-)
LP/J MGP_LPJ_G0016760
protein coding gene Chr1:183255000-183599740 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016713
protein coding gene Chr1:202167965-202518887 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017280
protein coding gene Chr1:179717266-180055588 (-)
PWK/PhJ MGP_PWKPhJ_G0015973
protein coding gene Chr1:172679950-173003784 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015750
protein coding gene Chr1:178756670-179100539 (-)
WSB/EiJ MGP_WSBEiJ_G0016248
protein coding gene Chr1:179923391-180253810 (-)



Homology
more
  • Human Ortholog
    PLD5, phospholipase D family member 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PLD5, phospholipase D family member 5
    Orthology source: HGNC, HomoloGene
  • Synonyms
    PLDC
  • Links
    NCBI Gene ID: 200150
    neXtProt AC: NX_Q8N7P1
    UniProt: Q8N7P1

  • Chr Location
    1q43; chr1:242085051-242530546 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
No abnormal phenotype was observed in a high-throughput screen, nor in a pathology assessment.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055214 Ensembl Gene Model | MGI Sequence Detail 313007 C57BL/6J ±  kb
transcript ENSMUST00000065967 Ensembl | MGI Sequence Detail 3557 Not Applicable  
polypeptide ENSMUSP00000069326 Ensembl | MGI Sequence Detail 536 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory