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Cdcp1 Gene Detail
Summary
  • Symbol
    Cdcp1
  • Name
    CUB domain containing protein 1
  • Synonyms
    9030022E12Rik, E030027H19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442010
    NCBI Gene: 109332
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:122999889-123045103 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 73.92 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1068 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442010
 protein coding gene Chr9:122999870-123045175 (-)
129S1/SvImJ ENSMUSG00200028775
 protein coding gene Chr9:120128140-120173191 (-)
A/J ENSMUSG00195026173
 protein coding gene Chr9:119268181-119313238 (-)
AKR/J ENSMUSG00220018752
 protein coding gene Chr9:119740001-119785374 (-)
BALB/cJ ENSMUSG00180025626
 protein coding gene Chr9:119807971-119853029 (-)
C3H/HeJ ENSMUSG00175017847
 protein coding gene Chr9:120044372-120089427 (-)
C57BL/6NJ ENSMUSG00215016735
 protein coding gene Chr9:119963545-120008925 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032856
 protein coding gene Chr9:118510000-118547757 (-)
CAST/EiJ ENSTCUG00005016715
 protein coding gene Chr9:119632827-119672039 (-)
CBA/J ENSMUSG00210035438
 protein coding gene Chr9:119768196-119813569 (-)
DBA/2J ENSMUSG00185015317
 protein coding gene Chr9:120103864-120149243 (-)
FVB/NJ ENSMUSG00205023758
 protein coding gene Chr9:119934747-119979800 (-)
JF1/MsJ ENSUMUG00000045278
 protein coding gene Chr9:119898699-119938757 (-)
LP/J ENSMUSG00230035223
 protein coding gene Chr9:120268297-120313345 (-)
NOD/ShiLtJ ENSMUSG00190014539
 protein coding gene Chr9:119711052-119756427 (-)
NZO/HlLtJ ENSMUSG00225023590
 protein coding gene Chr9:120528880-120574252 (-)
PWK/PhJ ENSLUMG00010034569
 protein coding gene Chr9:119795525-119834490 (-)
SPRET/EiJ ENSMSPG00010000464
 protein coding gene Chr9:121518836-121556643 (-)
WSB/EiJ ENSIUOG00005020505
 protein coding gene Chr9:119139198-119184300 (-)



Homology
more
  • Human Ortholog
    CDCP1, CUB domain containing protein 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDCP1, CUB domain containing protein 1
  • Synonyms
    CD318, SIMA135, TRASK
  • Links
    NCBI Gene ID: 64866
    UniProt: Q9H5V8

  • Chr Location
    3p21.31; chr3:45082277-45146482 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 2 alleles in 3 genetic backgrounds
    10 phenotypes from multigenic genotypes
    17 phenotype references
Mice homozygous for a knock-out allele are viable and fertile.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    748
  • Tissues
    26
  • cDNA Data
    54
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035498 Ensembl Gene Model | MGI Sequence Detail 45215 C57BL/6J ±  kb
transcript ENSMUST00000039229 Ensembl | MGI Sequence Detail 5310 Not Applicable  
polypeptide ENSMUSP00000042057 Ensembl | MGI Sequence Detail 833 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 3
Other
Accession IDs
less
MGI:1925928, MGI:2142933
References
more
  • Summaries
    All 47
    Developmental Gene Expression 5
    Gene Ontology 2
    Phenotypes 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:353282 Chen R, et al., Analyzing embryo dormancy at single-cell resolution reveals dynamic transcriptional responses and activation of integrin-Yap/Taz prosurvival signaling. Cell Stem Cell. 2024 Jul 18;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory