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D430036J16Rik Gene Detail
Summary
  • Symbol
    D430036J16Rik
  • Name
    RIKEN cDNA D430036J16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2441977
    NCBI Gene: 319405
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:81631930-81645156 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 44.61 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    187 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441977
lncRNA gene Chr9:81631551-81645156 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004654
antisense lncRNA gene Chr9:82237254-82252026 (+)
A/J MGP_AJ_G0004635
antisense lncRNA gene Chr9:79368834-79382415 (+)
AKR/J MGP_AKRJ_G0004618
antisense lncRNA gene Chr9:81211827-81225438 (+)
BALB/cJ MGP_BALBcJ_G0004619
antisense lncRNA gene Chr9:79016710-79030303 (+)
C3H/HeJ MGP_C3HHeJ_G0004568
antisense lncRNA gene Chr9:81778772-81792360 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004769
antisense lncRNA gene Chr9:84484677-84502412 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004219
antisense lncRNA gene Chr9:78424889-78438622 (+)
CAST/EiJ MGP_CASTEiJ_G0004524
antisense lncRNA gene Chr9:82160187-82173771 (+)
CBA/J MGP_CBAJ_G0004562
antisense lncRNA gene Chr9:87453620-87470182 (+)
DBA/2J MGP_DBA2J_G0004577
antisense lncRNA gene Chr9:78996900-79010787 (+)
FVB/NJ MGP_FVBNJ_G0004595
antisense lncRNA gene Chr9:78149714-78163297 (+)
LP/J MGP_LPJ_G0004658
antisense lncRNA gene Chr9:82435033-82449028 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004583
antisense lncRNA gene Chr9:88752609-88766249 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004768
antisense lncRNA gene Chr9:81458361-81473951 (+)
PWK/PhJ MGP_PWKPhJ_G0004478
antisense lncRNA gene Chr9:79169138-79182942 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004418
antisense lncRNA gene Chr9:81586809-81600308 (+)
WSB/EiJ MGP_WSBEiJ_G0004567
antisense lncRNA gene Chr9:81392435-81406815 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319405 NCBI Gene Model | MGI Sequence Detail 13227 C57BL/6J ±  kb
transcript NR_040393 RefSeq | MGI Sequence Detail 1732 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory