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Snhg11 Gene Detail
Summary
  • Symbol
    Snhg11
  • Name
    small nucleolar RNA host gene 11
  • Synonyms
    A930034L06Rik, E130013N09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441845
    NCBI Gene: 319317
Location & Maps
more
  • Sequence Map
    Chr2:158375638-158386145 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      10508 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 78.72 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SNHG11, small nucleolar RNA host gene 11
  • Vertebrate Orthologs
    2
  • Human Ortholog
    SNHG11, small nucleolar RNA host gene 11
    Orthology source: HGNC
  • Synonyms
    C20orf198, LINC00101, NCRNA00101
  • Links
    NCBI Gene ID: 128439

  • Chr Location
    20q11.23; chr20:38446654-38450921 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Targeted
    3
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015934 VEGA Gene Model | MGI Sequence Detail 10508 C57BL/6J ±  kb
transcript OTTMUST00000037853 VEGA | MGI Sequence Detail 5864 Not Applicable  
polypeptide OTTMUSP00000016996 VEGA | MGI Sequence Detail 87 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    193 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 6
Other
Accession IDs
less
MGI:2139102, MGI:2139119, MGI:2139341
References
more
  • Summaries
    All 28
    Developmental Gene Expression 5
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory