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Hmgxb3 Gene Detail
Summary
  • Symbol
    Hmgxb3
  • Name
    HMG box domain containing 3
  • Synonyms
    2510002C16Rik, A630042L21Rik, mKIAA0194
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441817
    NCBI Gene: 106894
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr18:61131279-61177050 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      45772 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 34.41 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    HMGXB3, HMG-box containing 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HMGXB3, HMG-box containing 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HMGX3, SMF
  • Links
    NCBI Gene ID: 22993
    neXtProt AC: NX_Q12766
    UniProt: Q12766

  • Chr Location
    5q32; chr5:150000606-150053143 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    14 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024622 Ensembl Gene Model | MGI Sequence Detail 45772 C57BL/6J ±  kb
transcript ENSMUST00000091884 Ensembl | MGI Sequence Detail 5101 Not Applicable  
polypeptide ENSMUSP00000089498 Ensembl | MGI Sequence Detail 1254 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    386 from dbSNP Build 142
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR009071 High mobility group box domain
    IPR036910 High mobility group box domain superfamily
Molecular
Reagents
less
  • All nucleic 18
    cDNA 17
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919564, MGI:2147216
References
more
  • Summaries
    All 30
    Developmental Gene Expression 3
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/16/2018
MGI 6.11
The Jackson Laboratory