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Hmgxb3 Gene Detail
Summary
  • Symbol
    Hmgxb3
  • Name
    HMG box domain containing 3
  • Synonyms
    2510002C16Rik, A630042L21Rik, mKIAA0194
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441817
    NCBI Gene: 106894
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr18:61131279-61177050 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      45772 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 34.41 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    HMGXB3, HMG-box containing 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HMGXB3, HMG-box containing 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HMGX3, SMF
  • Links
    NCBI Gene ID: 22993
    neXtProt AC: NX_Q12766
    UniProt: Q12766

  • Chr Location
    5q32; chr5:150000606-150053143 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000024622 Ensembl Gene Model | MGI Sequence Detail 45772 C57BL/6J ±  kb
    transcript ENSMUST00000091884 Ensembl | MGI Sequence Detail 5101 Not Applicable  
    polypeptide ENSMUSP00000089498 Ensembl | MGI Sequence Detail 1254 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      386 from dbSNP Build 142
    Protein
    Information
    less
    • UniProt
      9 Sequences
    • InterPro Domains
      IPR009071 High mobility group box domain
      IPR036910 High mobility group box domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 18
      cDNA 17
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1919564, MGI:2147216
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 3
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:261316 Perez-Garcia V, et al., Placentation defects are highly prevalent in embryonic lethal mouse mutants. Nature. 2018 Mar 22;555(7697):463-468

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    05/15/2018
    MGI 6.12
    The Jackson Laboratory