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Agbl5 Gene Detail
Summary
  • Symbol
    Agbl5
  • Name
    ATP/GTP binding protein-like 5
  • Synonyms
    9430057O19Rik, Ccp5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441745
    NCBI Gene: 231093
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:30888492-30906666 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 16.90 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441745
protein coding gene Chr5:30888492-30906965 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029398
protein coding gene Chr5:28846486-28865721 (+)
A/J MGP_AJ_G0029364
protein coding gene Chr5:27910669-27928945 (+)
AKR/J MGP_AKRJ_G0029315
protein coding gene Chr5:29062210-29080433 (+)
BALB/cJ MGP_BALBcJ_G0029375
protein coding gene Chr5:28432146-28450288 (+)
C3H/HeJ MGP_C3HHeJ_G0029096
protein coding gene Chr5:29054532-29078455 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029828
protein coding gene Chr5:30622623-30643546 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027066
protein coding gene Chr5:25388085-25406432 (+)
CAST/EiJ MGP_CASTEiJ_G0028507
protein coding gene Chr5:28153157-28171973 (+)
CBA/J MGP_CBAJ_G0029064
protein coding gene Chr5:31199089-31217336 (+)
DBA/2J MGP_DBA2J_G0029213
protein coding gene Chr5:28092486-28110767 (+)
FVB/NJ MGP_FVBNJ_G0029171
protein coding gene Chr5:27504427-27524466 (+)
LP/J MGP_LPJ_G0029298
protein coding gene Chr5:29311247-29329611 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029200
protein coding gene Chr5:32090011-32110128 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029862
protein coding gene Chr5:28561607-28580402 (+)
PWK/PhJ MGP_PWKPhJ_G0028231
protein coding gene Chr5:27209162-27228460 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028061
protein coding gene Chr5:27931862-27953239 (+)
WSB/EiJ MGP_WSBEiJ_G0028587
protein coding gene Chr5:28627470-28645641 (+)



Homology
more
  • Human Ortholog
    AGBL5, ATP/GTP binding protein like 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    AGBL5, ATP/GTP binding protein like 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CCP5, RP75
  • Links
    NCBI Gene ID: 60509
    neXtProt AC: NX_Q8NDL9
    UniProt: Q8NDL9

  • Chr Location
    2p23.3; chr2:27051423-27070622 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human AGBL5 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit increased susceptibility to HSV or VACV infection.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 231093 NCBI Gene Model | MGI Sequence Detail 18175 C57BL/6J ±  kb
transcript NR_122116 RefSeq | MGI Sequence Detail 3371 C57BL/6  
polypeptide Q09M02 UniProt | EBI | MGI Sequence Detail 886 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 53
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 8
    Phenotypes 27
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:259707 Ye B, et al., Klf4 glutamylation is required for cell reprogramming and early embryonic development in mice. Nat Commun. 2018 Mar 28;9(1):1261

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory