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Traf3ip3
Gene Detail
 Symbol
Name
ID
Traf3ip3
TRAF3 interacting protein 3
MGI:2441706
Synonyms 6030423D04Rik
Feature Type protein coding gene
Genetic Map
Chromosome 1
97.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:193175506-193201703 bp, - strand
From VEGA annotation of GRCm38

  26198 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11885  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Traf3ip3

Human
homologs
Human Homolog TRAF3IP3, TRAF3 interacting protein 3
NCBI Gene ID 80342
neXtProt AC  NX_Q9Y228
Human Synonyms  T3JAM
Human Chr (Location)  1q32; chr1:209756032-209782323 (+)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (108)    Tissues (13)    Images (43)
Theiler Stages: 23, 28
Assay TypeResults
RNA in situ 108
cDNA source data(33)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(37) cDNA(37)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027078 (Evidence)
Ensembl Gene ModelENSMUSG00000037318 (Evidence)
Entrez Gene215243 (Evidence)
UniGene261259
DFCITC1583547, TC1616497
DoTSDT.91350791, DT.94350493
NIA Mouse Gene IndexU022220
Consensus CDS ProjectCCDS15634.1
International Mouse Knockout Project StatusTraf3ip3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027078 VEGA Gene Model | MGI Sequence Detail 26198 C57BL/6J ±  kb
transcript OTTMUST00000066950 VEGA | MGI Sequence Detail 2119 Not Applicable 
polypeptide OTTMUSP00000033626 VEGA | MGI Sequence Detail 513 Not Applicable 

For the selected sequences
All sequences(49) RefSeq(2) UniProt(3)
Polymorphisms SNPs within 2kb(351 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000016603 TRAF3-interacting JNK-activating modulator
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)
Other
accession IDs
MGI:2138156

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory