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Ankef1 Gene Detail
Summary
  • Symbol
    Ankef1
  • Name
    ankyrin repeat and EF-hand domain containing 1
  • Synonyms
    Ankrd5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2441685
    NCBI Gene: 319196
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:136532321-136555854 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 67.46 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    140 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2441685
protein coding gene Chr2:136501910-136562091 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026558
protein coding gene Chr2:140282208-140340524 (+)
A/J MGP_AJ_G0026522
protein coding gene Chr2:134587638-134642166 (+)
AKR/J MGP_AKRJ_G0026496
protein coding gene Chr2:138454713-138512687 (+)
BALB/cJ MGP_BALBcJ_G0026534
protein coding gene Chr2:134966249-135024832 (+)
C3H/HeJ MGP_C3HHeJ_G0026277
protein coding gene Chr2:138905044-138960395 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026979
protein coding gene Chr2:144502027-144564969 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024356
protein coding gene Chr2:129136524-129198666 (+)
CAST/EiJ MGP_CASTEiJ_G0025738
protein coding gene Chr2:139253626-139332954 (+)
CBA/J MGP_CBAJ_G0026257
protein coding gene Chr2:149880487-149938176 (+)
DBA/2J MGP_DBA2J_G0026391
protein coding gene Chr2:133954417-134008499 (+)
FVB/NJ MGP_FVBNJ_G0026355
protein coding gene Chr2:132538165-132591926 (+)
LP/J MGP_LPJ_G0026495
protein coding gene Chr2:140451480-140507869 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026375
protein coding gene Chr2:153699739-153764850 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027034
protein coding gene Chr2:138462318-138528878 (+)
PWK/PhJ MGP_PWKPhJ_G0025474
protein coding gene Chr2:133559188-133642364 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025276
protein coding gene Chr2:137551921-137617921 (+)
WSB/EiJ MGP_WSBEiJ_G0025812
protein coding gene Chr2:139378947-139439429 (+)



Homology
more
  • Human Ortholog
    ANKEF1, ankyrin repeat and EF-hand domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ANKEF1, ankyrin repeat and EF-hand domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ANKRD5
  • Links
    NCBI Gene ID: 63926
    neXtProt AC: NX_Q9NU02
    UniProt: Q9NU02

  • Chr Location
    20p12.2; chr20:10034999-10056764 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11130
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ANKEF1
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    3
  • Genomic Mutations
    3 involving Ankef1
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319196 NCBI Gene Model | MGI Sequence Detail 23534 C57BL/6J ±  kb
transcript NM_175667 RefSeq | MGI Sequence Detail 2723 Not Specified  
polypeptide Q9D2J7 UniProt | EBI | MGI Sequence Detail 775 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139264
References
more
  • Summaries
    All 48
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 27
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:198682 Leo D, et al., Transgenic mouse models for ADHD. Cell Tissue Res. 2013 Oct;354(1):259-71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory