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Sapcd1 Gene Detail
Summary
  • Symbol
    Sapcd1
  • Name
    suppressor APC domain containing 1
  • Synonyms
    G7d, Ng23
  • Feature Type
    protein coding gene
  • IDs
    MGI:2388100
    NCBI Gene: 78376
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35025959-35028016 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 18.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2388100
protein coding gene Chr17:35025959-35028016 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023607
protein coding gene Chr17:35158693-35160615 (-)
A/J MGP_AJ_G0023567
protein coding gene Chr17:34000205-34002171 (-)
AKR/J MGP_AKRJ_G0023535
protein coding gene Chr17:34469511-34473819 (-)
BALB/cJ MGP_BALBcJ_G0023573
protein coding gene Chr17:34130237-34132496 (-)
C3H/HeJ MGP_C3HHeJ_G0023334
protein coding gene Chr17:34864926-34868027 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024012
protein coding gene Chr17:36501308-36503215 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021493
protein coding gene Chr17:31766555-31768676 (-)
CAST/EiJ MGP_CASTEiJ_G0022831
protein coding gene Chr17:34868308-34870307 (-)
CBA/J MGP_CBAJ_G0023312
protein coding gene Chr17:38010529-38012430 (-)
DBA/2J MGP_DBA2J_G0023440
protein coding gene Chr17:33318711-33321961 (-)
FVB/NJ MGP_FVBNJ_G0023407
protein coding gene Chr17:33154884-33157171 (-)
LP/J MGP_LPJ_G0023517
protein coding gene Chr17:35487487-35489312 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023429
protein coding gene Chr17:36940691-36944339 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024057
protein coding gene Chr17:34693732-34696428 (-)
PWK/PhJ MGP_PWKPhJ_G0022578
protein coding gene Chr17:32150058-32153012 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022398
protein coding gene Chr17:32703516-32705504 (-)
WSB/EiJ MGP_WSBEiJ_G0022894
protein coding gene Chr17:34806678-34809430 (-)



Homology
more
  • Human Ortholog
    SAPCD1, suppressor APC domain containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SAPCD1, suppressor APC domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf26, NG23
  • Links
    NCBI Gene ID: 401251
    neXtProt AC: NX_Q5SSQ6
    UniProt: Q5SSQ6

  • Chr Location
    6p21.33; chr6:31762996-31764850 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 78376 NCBI Gene Model | MGI Sequence Detail 2058 C57BL/6J ±  kb
transcript NM_023893 RefSeq | MGI Sequence Detail 953 C57BL/6  
polypeptide Q9CY86 UniProt | EBI | MGI Sequence Detail 146 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    Genomic 1
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:63110 Martin AM, et al., Immunol Today. 2000;21(7):Centerfold
  • Latest
    J:237787 Liu X, et al., Decreased expression levels of Ifi genes is associated to the increased resistance to spontaneous arthritis disease in mice deficiency of IL-1RA. BMC Immunol. 2016 Aug 02;17(1):25

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory