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Taf3 Gene Detail
Summary
  • Symbol
    Taf3
  • Name
    TATA-box binding protein associated factor 3
  • Synonyms
    4933439M23Rik, mTAFII140
  • Feature Type
    protein coding gene
  • IDs
    MGI:2388097
    NCBI Gene: 209361
  • Gene Overview
    MyGene.info: TAF3
Location & Maps
more
  • Sequence Map
    Chr2:9914552-10048596 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      134045 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 6.74 cM, cytoband A1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    TAF3, TATA-box binding protein associated factor 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TAF3, TATA-box binding protein associated factor 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TAF140, TAFII140, TAFII-140
  • Links
    NCBI Gene ID: 83860
    neXtProt AC: NX_Q5VWG9

  • Chr Location
    10p15.1; chr10:7818477-8016631 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 35415
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 frog, western clawed
  • HCOP
    human homology predictions: TAF3
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    39
  • Gene trapped
    37
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011183 VEGA Gene Model | MGI Sequence Detail 134045 C57BL/6J ±  kb
transcript OTTMUST00000026272 VEGA | MGI Sequence Detail 4792 Not Applicable  
polypeptide OTTMUSP00000012021 VEGA | MGI Sequence Detail 932 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    541 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 22
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
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MGI:1918534, MGI:2139366
References
more
  • Summaries
    All 45
    Developmental Gene Expression 7
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:181994 Kamileri I, et al., Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):2995-3000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory