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Ttc41 Gene Detail
Summary
  • Symbol
    Ttc41
  • Name
    tetratricopeptide repeat domain 41
  • Synonyms
    BC030307, Gnn
  • Feature Type
    protein coding gene
  • IDs
    MGI:2387653
    NCBI Gene: 103220
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:86541675-86612708 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 43.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1871 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2387653
 protein coding gene Chr10:86541675-86612708 (+)
129S1/SvImJ ENSMUSG00200027922
 protein coding gene Chr10:83045369-83109468 (+)
A/J ENSMUSG00195020440
 protein coding gene Chr10:83490505-83554534 (+)
AKR/J ENSMUSG00220020651
 protein coding gene Chr10:83092774-83156820 (+)
BALB/cJ ENSMUSG00180027860
 protein coding gene Chr10:83493606-83557650 (+)
C3H/HeJ ENSMUSG00175021131
 protein coding gene Chr10:83383229-83447256 (+)
C57BL/6NJ ENSMUSG00215015134
 protein coding gene Chr10:83040022-83104097 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015695
 protein coding gene Chr10:80582042-80658412 (+)
CAST/EiJ ENSTCUG00005029859
 protein coding gene Chr10:82803562-82871449 (+)
CBA/J ENSMUSG00210029453
 protein coding gene Chr10:83224632-83288665 (+)
DBA/2J ENSMUSG00185037589
 protein coding gene Chr10:83442127-83503071 (+)
FVB/NJ ENSMUSG00205011575
 protein coding gene Chr10:83100831-83165230 (+)
JF1/MsJ ENSUMUG00000010627
 protein coding gene Chr10:84797689-84861975 (+)
LP/J ENSMUSG00230017990
 protein coding gene Chr10:85328049-85392084 (+)
NOD/ShiLtJ ENSMUSG00190017119
 protein coding gene Chr10:83476066-83540096 (+)
NZO/HlLtJ ENSMUSG00225048753
 protein coding gene Chr10:89599284-89663307 (+)
PWK/PhJ ENSLUMG00010021612
 protein coding gene Chr10:83083041-83147440 (+)
SPRET/EiJ ENSMSPG00010027463
 protein coding gene Chr10:84556497-84615541 (+)
WSB/EiJ ENSIUOG00005035709
 protein coding gene Chr10:83170233-83230796 (+)



Homology
more
  • Human Ortholog
    TTC41P, tetratricopeptide repeat domain 41, pseudogene
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTC41P, tetratricopeptide repeat domain 41, pseudogene
  • Synonyms
    GNN, GNNP
  • Links
    NCBI Gene ID: 253724
    UniProt: Q6P2S7

  • Chr Location
    12q23.3; chr12:103843749-103930211 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    630
  • Tissues
    9
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 103220 NCBI Gene Model | MGI Sequence Detail 71034 C57BL/6J ±  kb
transcript NM_001003910 RefSeq | MGI Sequence Detail 4365 ZRU/MplStud  
polypeptide Q692V3 UniProt | EBI | MGI Sequence Detail 1318 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR051191 DDB1-CUL4-associated factor 12
    IPR007111 NACHT nucleoside triphosphatase
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
    IPR011990 Tetratricopeptide-like helical domain superfamily
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143606, MGI:2143759
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory