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Gipc3
Gene Detail
Symbol

Name
ID
Gipc3
GIPC PDZ domain containing family, member 3
MGI:2387006
Synonyms
Ahl5, Gipc3, Rgs19ip3
Feature Type
protein coding gene
Genetic Map
Chromosome 10
39.72 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:81337762-81343266 bp, - strand
From VEGA annotation of GRCm38

  5505 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:77068  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: GIPC3
Protein SuperFamily: uncharacterized protein with PDZ domain, GIPC type
Gene Tree: Gipc3

Human
homologs
GIPC3, GIPC PDZ domain containing family, member 3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 126326
neXtProt AC: NX_Q8TF64

Human Synonyms: C19orf64, DFNB15, DFNB72, DFNB95

Human Chr (Location): 19p13.3; chr19:3585541-3593541 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human GIPC3

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(1) QTL(2) Targeted(3)
Incidental mutations (data from CvDC )
Interactions
Gipc3 interacts with 17 markers (Mir92-1, Mir185, Mir326, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (2 annotations)
Process biological_process
Component cellular_component
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (12)    Tissues (12)    Tissue x Stage Matrix (view)
Assay TypeResults
RT-PCR 12
Other mouse links: GEO   Expression Atlas
Other vertebrate links: Xenbase gipc3    NEW 
Molecular
reagents
All nucleic(1) Primer pair(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000027857 (Evidence)
Ensembl Gene Model ENSMUSG00000034872 (Evidence)
Entrez Gene 209047 (Evidence)
UniGene 218755
DoTS DT.97337361
Consensus CDS Project CCDS24054.1
International Mouse Phenotyping Consortium Status Gipc3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027857 VEGA Gene Model | MGI Sequence Detail 5505 C57BL/6J ±  kb
transcript OTTMUST00000068972 VEGA | MGI Sequence Detail 1024 Not Applicable 
polypeptide OTTMUSP00000034973 VEGA | MGI Sequence Detail 297 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(2 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001478 PDZ domain
InterPro IPR017379 Uncharacterised conserved protein UCP038083, PDZ
Protein Ontology PR:000030378 PDZ domain-containing protein GIPC3
References
(Earliest) J:78673 Saitoh T, et al., Molecular cloning and characterization of mouse Gipc3. Int J Mol Med. 2002 Mar;9(3):251-6
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(22)
Other
accession IDs
MGI:3514193

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory