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Cpne1 Gene Detail
Summary
  • Symbol
    Cpne1
  • Name
    copine I
  • Synonyms
    1810028N16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2386621
    NCBI Gene: 266692
  • Gene Overview
    MyGene.info: CPNE1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:156071842-156111965 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 77.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    314 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2386621
protein coding gene Chr2:156071841-156111965 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026755
protein coding gene Chr2:160929573-160971326 (-)
A/J MGP_AJ_G0026721
protein coding gene Chr2:154542914-154583001 (-)
AKR/J MGP_AKRJ_G0026692
protein coding gene Chr2:159028972-159069725 (-)
BALB/cJ MGP_BALBcJ_G0026730
protein coding gene Chr2:154837789-154877923 (-)
C3H/HeJ MGP_C3HHeJ_G0026473
protein coding gene Chr2:159390670-159434189 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027179
protein coding gene Chr2:165659284-165702757 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024549
protein coding gene Chr2:148037055-148078205 (-)
CAST/EiJ MGP_CASTEiJ_G0025934
protein coding gene Chr2:159718577-159758710 (-)
CBA/J MGP_CBAJ_G0026450
protein coding gene Chr2:171679891-171729702 (-)
DBA/2J MGP_DBA2J_G0026587
protein coding gene Chr2:153714839-153754971 (-)
FVB/NJ MGP_FVBNJ_G0026554
protein coding gene Chr2:152094782-152135778 (-)
LP/J MGP_LPJ_G0026692
protein coding gene Chr2:161069842-161111976 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026575
protein coding gene Chr2:175632735-175675101 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027235
protein coding gene Chr2:158906188-158946659 (-)
PWK/PhJ MGP_PWKPhJ_G0025668
protein coding gene Chr2:153221336-153261835 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025471
protein coding gene Chr2:157850673-157893079 (-)
WSB/EiJ MGP_WSBEiJ_G0026004
protein coding gene Chr2:159794453-159836889 (-)



Homology
more
  • Human Ortholog
    CPNE1, copine 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CPNE1, copine 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    COPN1, CPN1
  • Links
    NCBI Gene ID: 8904
    neXtProt AC: NX_Q99829
    UniProt: Q99829

  • Chr Location
    20q11.22; chr20:35626031-35664956 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074643 Ensembl Gene Model | MGI Sequence Detail 40124 C57BL/6J ±  kb
transcript ENSMUST00000109607 Ensembl | MGI Sequence Detail 3441 Not Applicable  
polypeptide ENSMUSP00000105236 Ensembl | MGI Sequence Detail 536 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:1917027
References
more
  • Summaries
    All 26
    Gene Ontology 6
  • Earliest
    J:86882 Creutz CE, et al., The copines, a novel class of C2 domain-containing, calcium-dependent, phospholipid-binding proteins conserved from Paramecium to humans. J Biol Chem. 1998 Jan 16;273(3):1393-402
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory