About   Help   FAQ
Papln Gene Detail
Summary
  • Symbol
    Papln
  • Name
    papilin, proteoglycan-like sulfated glycoprotein
  • Synonyms
    E030033C16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2386139
    NCBI Gene: 170721
  • Gene Overview
    MyGene.info: PAPLN
Location & Maps
more
  • Sequence Map
    Chr12:83763634-83792382 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      28749 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 38.87 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PAPLN, papilin, proteoglycan like sulfated glycoprotein
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PAPLN, papilin, proteoglycan like sulfated glycoprotein
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 89932
    neXtProt AC: NX_O95428

  • Chr Location
    14q24.2; chr14:73235843-73274640 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Targeted
    5
  • Genomic Mutations
    1 involving Papln
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027564 VEGA Gene Model | MGI Sequence Detail 28749 C57BL/6J ±  kb
transcript OTTMUST00000068258 VEGA | MGI Sequence Detail 4373 Not Applicable  
polypeptide OTTMUSP00000034464 VEGA | MGI Sequence Detail 1302 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    195 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    Genomic 1
    cDNA 27
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:2444137
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:74708 Kramerova IA, et al., Papilin in development; a pericellular protein with a homology to the ADAMTS metalloproteinases. Development. 2000 Dec;127(24):5475-85
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/17/2016
MGI 6.05
The Jackson Laboratory