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Pnpla7 Gene Detail
Summary
  • Symbol
    Pnpla7
  • Name
    patatin-like phospholipase domain containing 7
  • Synonyms
    E430013P11Rik, MGC:6929, NRE
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385325
    NCBI Gene: 241274
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:24976033-25054057 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 16.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    386 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385325
protein coding gene Chr2:24975306-25054072 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025417
protein coding gene Chr2:22820318-22903887 (+)
A/J MGP_AJ_G0025394
protein coding gene Chr2:21930875-22017204 (+)
AKR/J MGP_AKRJ_G0025364
protein coding gene Chr2:22686660-22769047 (+)
BALB/cJ MGP_BALBcJ_G0025390
protein coding gene Chr2:22056169-22139267 (+)
C3H/HeJ MGP_C3HHeJ_G0025151
protein coding gene Chr2:22613466-22698772 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025834
protein coding gene Chr2:23548318-23639465 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023245
protein coding gene Chr2:20869512-20951759 (+)
CAST/EiJ MGP_CASTEiJ_G0024614
protein coding gene Chr2:22498760-22582131 (+)
CBA/J MGP_CBAJ_G0025129
protein coding gene Chr2:24361268-24469609 (+)
DBA/2J MGP_DBA2J_G0025262
protein coding gene Chr2:21793351-21875235 (+)
FVB/NJ MGP_FVBNJ_G0025224
protein coding gene Chr2:21535550-21613445 (+)
LP/J MGP_LPJ_G0025348
protein coding gene Chr2:22765137-22855169 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025255
protein coding gene Chr2:24592650-24685424 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025893
protein coding gene Chr2:22625601-22712391 (+)
PWK/PhJ MGP_PWKPhJ_G0024362
protein coding gene Chr2:21597875-21682342 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024162
protein coding gene Chr2:22769021-22860986 (+)
WSB/EiJ MGP_WSBEiJ_G0024683
protein coding gene Chr2:22701374-22785981 (+)



Homology
more
  • Human Ortholog
    PNPLA7, patatin like phospholipase domain containing 7
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PNPLA7, patatin like phospholipase domain containing 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C9orf111, NTEL1, NTE-R1
  • Links
    NCBI Gene ID: 375775
    neXtProt AC: NX_Q6ZV29
    UniProt: Q6ZV29

  • Chr Location
    9q34.3; chr9:137459449-137550666 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036833 Ensembl Gene Model | MGI Sequence Detail 78025 C57BL/6J ±  kb
transcript ENSMUST00000045295 Ensembl | MGI Sequence Detail 4574 Not Applicable  
polypeptide ENSMUSP00000044078 Ensembl | MGI Sequence Detail 1352 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 77
    cDNA 77

    Microarray probesets 4
Other
Accession IDs
less
MGI:2442947
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:183810 Chang PA, et al., Identification of two novel splicing variants of murine NTE-related esterase. Gene. 2012 Apr 15;497(2):164-71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory