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Acsm2
Gene Detail
Symbol

Name
ID
Acsm2
acyl-CoA synthetase medium-chain family member 2
MGI:2385289
Feature Type
protein coding gene
Genetic Map
Chromosome 7
63.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:119561493-119596601 bp, + strand
From VEGA annotation of GRCm38

  35109 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:70404  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

HCOP human homology predictions: ACSM2A
Gene Tree: Acsm2

Human
homologs
ACSM2A, acyl-CoA synthetase medium-chain family member 2A
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 123876
neXtProt AC: NX_Q08AH3

Human Synonyms: A-923A4.1, ACSM2

Human Chr (Location): 16p12.3; chr16:20451526-20487669 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Acsm2 interacts with 383 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process fatty acid metabolic process, lipid metabolic process, ...
Component mitochondrion
Function ATP binding, butyrate-CoA ligase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (110)    Tissues (99)    Images (7)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 110
cDNA source data(337)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(337) cDNA(337)
Microarray probesets(7)
Other database
links
VEGA Gene Model OTTMUSG00000027306 (Evidence)
Ensembl Gene Model ENSMUSG00000030945 (Evidence)
Entrez Gene 233799 (Evidence)
UniGene 268448
DFCI TC1571917, TC1618351, TC1602757, TC1644744
DoTS DT.97368632, DT.55216269, DT.87060543, DT.94329347
NIA Mouse Gene Index U040687
EC 6.2.1.2
Consensus CDS Project CCDS21782.1, CCDS52379.1, CCDS52380.1
International Mouse Phenotyping Consortium Status Acsm2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027306 VEGA Gene Model | MGI Sequence Detail 35109 C57BL/6J ±  kb
transcript OTTMUST00000067484 VEGA | MGI Sequence Detail 2649 Not Applicable 
polypeptide OTTMUSP00000033968 VEGA | MGI Sequence Detail 575 Not Applicable 

For the selected sequences
All sequences(65) RefSeq(6) UniProt(5)
Polymorphisms
SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020845 AMP-binding, conserved site
InterPro IPR000873 AMP-dependent synthetase/ligase
InterPro IPR025110 Domain of unknown function DUF4009
Protein Ontology PR:000004548 acyl-coenzyme A synthetase ACSM2, mitochondrial
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:2141900

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory