About   Help   FAQ
Acsm2
Gene Detail
Symbol

Name
ID
Acsm2
acyl-CoA synthetase medium-chain family member 2
MGI:2385289
Feature Type
protein coding gene
Genetic Map
Chromosome 7
63.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:119561493-119596601 bp, + strand
From VEGA annotation of GRCm38

  35109 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:70404  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Gene Tree: Acsm2

Human
homologs
Human Homolog ACSM2A, acyl-CoA synthetase medium-chain family member 2A
NCBI Gene ID 123876
neXtProt AC  NX_Q08AH3
Human Synonyms  A-923A4.1, ACSM2
Human Chr (Location)  16p12.3; chr16:20451537-20487669 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Acsm2 interacts with 383 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process fatty acid metabolic process, lipid metabolic process, ...
Component mitochondrion
Function ATP binding, butyrate-CoA ligase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (110)    Tissues (99)    Images (7)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 110
cDNA source data(337)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(337) cDNA(337)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000027306 (Evidence)
Ensembl Gene ModelENSMUSG00000030945 (Evidence)
Entrez Gene233799 (Evidence)
UniGene268448
DFCITC1644744, TC1618351, TC1571917, TC1602757
DoTSDT.97368632, DT.55216269, DT.87060543, DT.94329347
NIA Mouse Gene IndexU040687
EC6.2.1.2
Consensus CDS ProjectCCDS21782.1, CCDS52379.1, CCDS52380.1
International Mouse Knockout Project StatusAcsm2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027306 VEGA Gene Model | MGI Sequence Detail 35109 C57BL/6J ±  kb
transcript OTTMUST00000067484 VEGA | MGI Sequence Detail 2649 Not Applicable 
polypeptide OTTMUSP00000033968 VEGA | MGI Sequence Detail 575 Not Applicable 

For the selected sequences
All sequences(69) RefSeq(6) UniProt(9)
Polymorphisms
SNPs within 2kb(149 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020845 AMP-binding, conserved site
InterPro IPR000873 AMP-dependent synthetase/ligase
InterPro IPR025110 Domain of unknown function DUF4009
Protein Ontology PR:000004548 acyl-coenzyme A synthetase ACSM2, mitochondrial
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2141900

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/18/2014
MGI 5.20
The Jackson Laboratory