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Cyp2j13
Gene Detail
Symbol

Name
ID
Cyp2j13
cytochrome P450, family 2, subfamily j, polypeptide 13
MGI:2385197
Feature Type
protein coding gene
Genetic Map
Chromosome 4
44.22 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:96027534-96077546 bp, - strand
From VEGA annotation of GRCm38

  50013 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:138297  Vertebrate Homology Class
1 mouse; 1 rat

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2j13

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2j13 interacts with 329 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process oxidation-reduction process
Component cellular_component
Function metal ion binding, monooxygenase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(20)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(20) cDNA(20)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000007936 (Evidence)
Ensembl Gene ModelENSMUSG00000028571 (Evidence)
Entrez Gene230459 (Evidence)
UniGene268175
DFCITC1587345, TC1594164, TC1714248
DoTSDT.110830778, DT.97390784, DT.97399217
NIA Mouse Gene IndexU025275
Consensus CDS ProjectCCDS18368.1
International Mouse Knockout Project StatusCyp2j13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007936 VEGA Gene Model | MGI Sequence Detail 50013 C57BL/6J ±  kb
transcript OTTMUST00000018006 VEGA | MGI Sequence Detail 1648 Not Applicable 
polypeptide OTTMUSP00000008269 VEGA | MGI Sequence Detail 433 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(8) UniProt(6)
Polymorphisms
SNPs within 2kb(375 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
InterPro IPR008071 Cytochrome P450, E-class, group I, CYP2J-like
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory