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Slc16a4
Gene Detail
 Symbol
Name
ID
Slc16a4
solute carrier family 16 (monocarboxylic acid transporters), member 4
MGI:2385183
Feature Type protein coding gene
Genetic Map
Chromosome 3
46.81 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:107291230-107312115 bp, + strand
From VEGA annotation of GRCm38

  20886 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:74529  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc16a4

Human
homologs
Human Homolog SLC16A4, solute carrier family 16, member 4
NCBI Gene ID 9122
neXtProt AC  NX_O15374
Human Synonyms  MCT4, MCT5
Human Chr (Location)  1p13.3; chr1:110362851-110391409 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc16a4 interacts with 117 markers (Mir7-2, Mir7b, Mir10b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process ion transmembrane transport, transmembrane transport, ...
Component integral component of membrane, membrane, ...
Function monocarboxylic acid transmembrane transporter activity, symporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (62)    Tissues (8)    Images (22)
Theiler Stages: 23
Assay TypeResults
RNA in situ 62
cDNA source data(25)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(26) cDNA(25) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024152 (Evidence)
Ensembl Gene ModelENSMUSG00000027896 (Evidence)
Entrez Gene229699 (Evidence)
UniGene38384
DFCITC1583915, TC1589641
DoTSDT.101709981, DT.55193770
NIA Mouse Gene IndexU003717
Consensus CDS ProjectCCDS17736.1
International Mouse Knockout Project StatusSlc16a4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024152 VEGA Gene Model | MGI Sequence Detail 20886 C57BL/6J ±  kb
transcript OTTMUST00000059086 VEGA | MGI Sequence Detail 2248 Not Applicable 
polypeptide OTTMUSP00000028710 VEGA | MGI Sequence Detail 500 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(238 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011701 Major facilitator superfamily
InterPro IPR020846 Major facilitator superfamily domain
InterPro IPR016196 Major facilitator superfamily domain, general substrate transporter
Protein Ontology PR:000014952 monocarboxylate transporter 5
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:2139973

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory