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Slc35c2 Gene Detail
Summary
  • Symbol
    Slc35c2
  • Name
    solute carrier family 35, member C2
  • Synonyms
    CGI-15, D2Wsu58e, MGC:18664, Ovcov1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385166
    NCBI Gene: 228875
  • Gene Overview
    MyGene.info: SLC35C2
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr2:165276554-165287869 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      11316 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 85.53 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    SLC35C2, solute carrier family 35 member C2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SLC35C2, solute carrier family 35 member C2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BA394O2.1, C20orf5, CGI-15, OVCOV1
  • Links
    NCBI Gene ID: 51006
    neXtProt AC: NX_Q9NQQ7
    UniProt: Q9NQQ7

  • Chr Location
    20q13.12; chr20:46349528-46364461 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    148
  • Tissues
    129
  • cDNA Data
    12
  • Literature Summary
    5
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001172 VEGA Gene Model | MGI Sequence Detail 11316 C57BL/6J ±  kb
transcript OTTMUST00000002296 VEGA | MGI Sequence Detail 1843 Not Applicable  
polypeptide OTTMUSP00000001127 VEGA | MGI Sequence Detail 364 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    109 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 12
    Primer pair 2

    Microarray probesets 6
Other
Accession IDs
less
MGD-MRK-34239, MGI:106545, MGI:2139522
References
more
  • Summaries
    All 36
    Developmental Gene Expression 5
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/15/2018
MGI 6.12 		The Jackson Laboratory