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Bpifb5 Gene Detail
Summary
  • Symbol
    Bpifb5
  • Name
    BPI fold containing family B, member 5
  • Synonyms
    BC018465, MGC:27784
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385160
    NCBI Gene: 228802
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:154223742-154240902 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 76.28 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385160
protein coding gene Chr2:154223742-154240902 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026710
protein coding gene Chr2:158942175-158960445 (+)
A/J MGP_AJ_G0026676
protein coding gene Chr2:152555592-152572989 (+)
AKR/J MGP_AKRJ_G0026647
protein coding gene Chr2:157037664-157054763 (+)
BALB/cJ MGP_BALBcJ_G0026686
protein coding gene Chr2:152895708-152914013 (+)
C3H/HeJ MGP_C3HHeJ_G0026428
protein coding gene Chr2:157407582-157424665 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027135
protein coding gene Chr2:163564917-163585606 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024505
protein coding gene Chr2:146148539-146165629 (+)
CAST/EiJ MGP_CASTEiJ_G0025889
protein coding gene Chr2:157748271-157767410 (+)
CBA/J MGP_CBAJ_G0026407
protein coding gene Chr2:169566235-169586692 (+)
DBA/2J MGP_DBA2J_G0026542
protein coding gene Chr2:151807631-151825414 (+)
FVB/NJ MGP_FVBNJ_G0026508
protein coding gene Chr2:150220228-150237186 (+)
LP/J MGP_LPJ_G0026647
protein coding gene Chr2:159038495-159055140 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026530
protein coding gene Chr2:173592287-173609939 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027190
protein coding gene Chr2:156914957-156936545 (+)
PWK/PhJ MGP_PWKPhJ_G0025623
protein coding gene Chr2:151367326-151384560 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025426
protein coding gene Chr2:155867743-155884981 (+)
WSB/EiJ MGP_WSBEiJ_G0025959
protein coding gene Chr2:157832111-157849848 (+)



Homology
more
  • Human Ortholog
    BPIFB5P, BPI fold containing family B member 5, pseudogene
  • Vertebrate Orthologs
    4
  • Human Ortholog
    BPIFB5P, BPI fold containing family B member 5, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 100505383

  • Chr Location
    chr20:33316869-33329562 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 228802 NCBI Gene Model | MGI Sequence Detail 17161 C57BL/6J ±  kb
transcript NM_144890 RefSeq | MGI Sequence Detail 1637 C57BL/6  
polypeptide NP_659139 RefSeq | MGI Sequence Detail 490 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain superfamily
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
Molecular
Reagents
less
  • All nucleic 38
    cDNA 38

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory