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Rabgap1 Gene Detail
Summary
  • Symbol
    Rabgap1
  • Name
    RAB GTPase activating protein 1
  • Synonyms
    Gapcena
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385139
    NCBI Gene: 227800
  • Gene Overview
    MyGene.info: RABGAP1
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:37443281-37566454 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 24.19 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    242 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385139
protein coding gene Chr2:37443279-37566454 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025696
protein coding gene Chr2:36133839-36267845 (+)
A/J MGP_AJ_G0025673
protein coding gene Chr2:34658646-34784908 (+)
AKR/J MGP_AKRJ_G0025643
protein coding gene Chr2:35807990-35942336 (+)
BALB/cJ MGP_BALBcJ_G0025668
protein coding gene Chr2:34723374-34847174 (+)
C3H/HeJ MGP_C3HHeJ_G0025429
protein coding gene Chr2:35733394-35859008 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026114
protein coding gene Chr2:37176289-37302410 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023519
protein coding gene Chr2:33332793-33458103 (+)
CAST/EiJ MGP_CASTEiJ_G0024892
protein coding gene Chr2:35637943-35770204 (+)
CBA/J MGP_CBAJ_G0025408
protein coding gene Chr2:38571148-38701087 (+)
DBA/2J MGP_DBA2J_G0025540
protein coding gene Chr2:34404536-34528636 (+)
FVB/NJ MGP_FVBNJ_G0025502
protein coding gene Chr2:34285073-34409727 (+)
LP/J MGP_LPJ_G0025627
protein coding gene Chr2:36029396-36155377 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025533
protein coding gene Chr2:38166779-38298383 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026172
protein coding gene Chr2:35687640-35822366 (+)
PWK/PhJ MGP_PWKPhJ_G0024634
protein coding gene Chr2:34298803-34424857 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024439
protein coding gene Chr2:35803892-35931775 (+)
WSB/EiJ MGP_WSBEiJ_G0024960
protein coding gene Chr2:35878591-36003988 (+)



Homology
more
  • Human Ortholog
    RABGAP1, RAB GTPase activating protein 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RABGAP1, RAB GTPase activating protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GAPCENA, TBC1D11
  • Links
    NCBI Gene ID: 23637
    neXtProt AC: NX_Q9Y3P9
    UniProt: Q9Y3P9

  • Chr Location
    9q33.2-q33.3; chr9:122931638-123104869 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 227800 NCBI Gene Model | MGI Sequence Detail 123174 C57BL/6J ±  kb
transcript NR_156419 RefSeq | MGI Sequence Detail 5193 C57BL/6  
polypeptide A2AWA9 UniProt | EBI | MGI Sequence Detail 1064 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 87
    cDNA 87

    Microarray probesets 5
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:238636 Fededa JP, et al., MicroRNA-34/449 controls mitotic spindle orientation during mammalian cortex development. EMBO J. 2016 Nov 15;35(22):2386-2398

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory