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Odr4 Gene Detail
Summary
  • Symbol
    Odr4
  • Name
    odr4 GPCR localization factor homolog
  • Synonyms
    1810053E15Rik, BC003331, MGC:7150
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385108
    NCBI Gene: 226499
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:150361311-150393055 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 63.84 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    444 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385108
protein coding gene Chr1:150361305-150393080 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016575
protein coding gene Chr1:155006293-155040805 (-)
A/J MGP_AJ_G0016557
protein coding gene Chr1:148761979-148793498 (-)
AKR/J MGP_AKRJ_G0016522
protein coding gene Chr1:153308608-153341490 (-)
BALB/cJ MGP_BALBcJ_G0016517
protein coding gene Chr1:149287050-149322589 (-)
C3H/HeJ MGP_C3HHeJ_G0016342
protein coding gene Chr1:153483841-153524040 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016978
protein coding gene Chr1:160382255-160415418 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014687
protein coding gene Chr1:141116779-141148946 (-)
CAST/EiJ MGP_CASTEiJ_G0015921
protein coding gene Chr1:152881195-152914868 (-)
CBA/J MGP_CBAJ_G0016316
protein coding gene Chr1:166047869-166085672 (-)
DBA/2J MGP_DBA2J_G0016422
protein coding gene Chr1:147814782-147847795 (-)
FVB/NJ MGP_FVBNJ_G0016420
protein coding gene Chr1:146240734-146301944 (-)
LP/J MGP_LPJ_G0016493
protein coding gene Chr1:156036704-156073667 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016446
protein coding gene Chr1:173742520-173776510 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017014
protein coding gene Chr1:153117553-153154613 (-)
PWK/PhJ MGP_PWKPhJ_G0015707
protein coding gene Chr1:146729914-146761620 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015493
protein coding gene Chr1:151872919-151932506 (-)
WSB/EiJ MGP_WSBEiJ_G0015984
protein coding gene Chr1:153195768-153228242 (-)



Homology
more
  • Human Ortholog
    ODR4, odr-4 GPCR localization factor homolog
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ODR4, odr-4 GPCR localization factor homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf27, odr-4, TTG1
  • Links
    NCBI Gene ID: 54953
    neXtProt AC: NX_Q5SWX8
    UniProt: Q5SWX8

  • Chr Location
    1q31.1; chr1:186375758-186421375 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 41202
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ODR4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 226499 NCBI Gene Model | MGI Sequence Detail 31745 C57BL/6J ±  kb
transcript NM_145511 RefSeq | MGI Sequence Detail 3255 C57BL/6  
polypeptide Q4PJX1 UniProt | EBI | MGI Sequence Detail 447 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 78
    cDNA 78

    Microarray probesets 4
Other
Accession IDs
less
MGI:1917306
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/07/2019
MGI 6.14
The Jackson Laboratory