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Rab29
Gene Detail
Symbol

Name
ID
Rab29
RAB29, member RAS oncogene family
MGI:2385107
Synonyms
MGC:28972, MGC:36539, Rab7l1
Feature Type
protein coding gene
Genetic Map
Chromosome 1
57.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:131867224-131872887 bp, + strand
From VEGA annotation of GRCm38

  5664 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20842  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: RAB29
Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab29

Human
homologs
RAB29, RAB29, member RAS oncogene family
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 8934
neXtProt AC: NX_O14966

Human Synonyms: RAB7L, RAB7L1

Human Chr (Location): 1q32; chr1:205767986-205775487 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(7) Targeted(2)
Incidental mutations (data from APF )
Interactions
Rab29 interacts with 43 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (29 annotations)
Process cell differentiation, Golgi organization, ...
Component cytoplasm, cytoskeleton, ...
Function GTPase activity, GTP binding, ...
External Resources: FuncBase
Expression
cDNA source data(37)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab29    NEW 
Molecular
reagents
All nucleic(37) cDNA(37)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000017320 (Evidence)
Ensembl Gene Model ENSMUSG00000026433 (Evidence)
Entrez Gene 226422 (Evidence)
UniGene 34027
DFCI TC1614998, TC1616367, TC1581581
DoTS DT.97363187, DT.55206650, DT.50315611, DT.101717881
NIA Mouse Gene Index U000787
Consensus CDS Project CCDS15276.1
International Mouse Phenotyping Consortium Status Rab29
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017320 VEGA Gene Model | MGI Sequence Detail 5664 C57BL/6J ±  kb
transcript OTTMUST00000042094 VEGA | MGI Sequence Detail 1202 Not Applicable 
polypeptide OTTMUSP00000018926 VEGA | MGI Sequence Detail 204 Not Applicable 

For the selected sequences
All sequences(48) RefSeq(6) UniProt(4)
Polymorphisms
SNPs within 2kb(64 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013641 ras-related protein Rab-7L1
References
(Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:206826 Beilina A, et al., Unbiased screen for interactors of leucine-rich repeat kinase 2 supports a common pathway for sporadic and familial Parkinson disease. Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2626-31
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory