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Rab29
Gene Detail
 Symbol
Name
ID
Rab29
RAB29, member RAS oncogene family
MGI:2385107
Synonyms MGC:28972, MGC:36539, Rab7l1
Feature Type protein coding gene
Genetic Map
Chromosome 1
57.21 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:131867224-131872887 bp, + strand
From VEGA annotation of GRCm38

  5664 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20842  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab29

Human
homologs
Human Homolog RAB29, RAB29, member RAS oncogene family
NCBI Gene ID 8934
neXtProt AC  NX_O14966
Human Synonyms  RAB7L, RAB7L1
Human Chr (Location)  1q32; chr1:205767986-205775487 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Gene trapped(7) Targeted(2)
Incidental mutations (data from APF )
Interactions
Rab29 interacts with 43 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process Golgi organization, positive regulation of intracellular protein transport, ...
Component cytoplasm, extracellular vesicular exosome, ...
Function GTP binding, nucleotide binding
External Resources: FuncBase
Expression
cDNA source data(37)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(37) cDNA(37)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000017320 (Evidence)
Ensembl Gene ModelENSMUSG00000026433 (Evidence)
Entrez Gene226422 (Evidence)
UniGene34027
DFCITC1581581, TC1614998, TC1616367
DoTSDT.101717881, DT.50315611, DT.55206650, DT.97363187
NIA Mouse Gene IndexU000787
Consensus CDS ProjectCCDS15276.1
International Mouse Knockout Project StatusRab29
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017320 VEGA Gene Model | MGI Sequence Detail 5664 C57BL/6J ±  kb
transcript OTTMUST00000042094 VEGA | MGI Sequence Detail 1202 Not Applicable 
polypeptide OTTMUSP00000018926 VEGA | MGI Sequence Detail 204 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(4) UniProt(4)
Polymorphisms SNPs within 2kb(64 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013641 ras-related protein Rab-7L1
References (Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory