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Ubtd1 Gene Detail
Summary
  • Symbol
    Ubtd1
  • Name
    ubiquitin domain containing 1
  • Synonyms
    MGC:28905
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385092
    NCBI Gene: 226122
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:41981763-42034643 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 35.56 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    308 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385092
protein coding gene Chr19:41981763-42034650 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025134
protein coding gene Chr19:41287515-41346426 (+)
A/J MGP_AJ_G0025111
protein coding gene Chr19:39303341-39359781 (+)
AKR/J MGP_AKRJ_G0025079
protein coding gene Chr19:40594359-40651135 (+)
BALB/cJ MGP_BALBcJ_G0025105
protein coding gene Chr19:39362208-39420181 (+)
C3H/HeJ MGP_C3HHeJ_G0024865
protein coding gene Chr19:40744395-40800030 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025548
protein coding gene Chr19:42359734-42412214 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022962
protein coding gene Chr19:38655920-38711374 (+)
CAST/EiJ MGP_CASTEiJ_G0024330
protein coding gene Chr19:40419997-40476688 (+)
CBA/J MGP_CBAJ_G0024845
protein coding gene Chr19:44432689-44496538 (+)
DBA/2J MGP_DBA2J_G0024977
protein coding gene Chr19:39153444-39209839 (+)
FVB/NJ MGP_FVBNJ_G0024938
protein coding gene Chr19:38927565-38984397 (+)
LP/J MGP_LPJ_G0025063
protein coding gene Chr19:41279351-41338040 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024969
protein coding gene Chr19:44054684-44116114 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025606
protein coding gene Chr19:40632707-40689910 (+)
PWK/PhJ MGP_PWKPhJ_G0024079
protein coding gene Chr19:39030617-39086223 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023883
protein coding gene Chr19:39376154-39434381 (+)
WSB/EiJ MGP_WSBEiJ_G0024400
protein coding gene Chr19:40784882-40842461 (+)



Homology
more
  • Human Ortholog
    UBTD1, ubiquitin domain containing 1
  • Vertebrate Orthologs
    11
  • Human Ortholog
    UBTD1, ubiquitin domain containing 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 80019
    neXtProt AC: NX_Q9HAC8
    UniProt: Q9HAC8

  • Chr Location
    10q24.1-q24.2; chr10:97498882-97571210 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 11799
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;2 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: UBTD1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025171 Ensembl Gene Model | MGI Sequence Detail 52881 C57BL/6J ±  kb
transcript ENSMUST00000026170 Ensembl | MGI Sequence Detail 1529 Not Applicable  
polypeptide ENSMUSP00000026170 Ensembl | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 32
    cDNA 32

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Phenotypes 6
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:201479 Srivastava U, et al., Differences in health status affect susceptibility and mapping of genetic loci for atherosclerosis (fatty streak) in inbred mice. Arterioscler Thromb Vasc Biol. 2012 Oct;32(10):2380-6

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory