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Rrp36 Gene Detail
Summary
  • Symbol
    Rrp36
  • Name
    ribosomal RNA processing 36 homolog (S. cerevisiae)
  • Synonyms
    BC011248, MGC:19067
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385053
    NCBI Gene: 224823
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:46667442-46674285 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 22.90 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    49 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385053
protein coding gene Chr17:46666324-46674352 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023825
protein coding gene Chr17:47746354-47754496 (-)
A/J MGP_AJ_G0023783
protein coding gene Chr17:46599423-46606773 (-)
AKR/J MGP_AKRJ_G0023754
protein coding gene Chr17:46945745-46951940 (-)
BALB/cJ MGP_BALBcJ_G0023787
protein coding gene Chr17:46500834-46507172 (-)
C3H/HeJ MGP_C3HHeJ_G0023550
protein coding gene Chr17:47689818-47698026 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024230
protein coding gene Chr17:49796974-49803735 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021680
protein coding gene Chr17:43381972-43388361 (-)
CAST/EiJ MGP_CASTEiJ_G0023032
protein coding gene Chr17:47770943-47781704 (-)
CBA/J MGP_CBAJ_G0023527
protein coding gene Chr17:51590291-51597089 (-)
DBA/2J MGP_DBA2J_G0023653
protein coding gene Chr17:45370392-45377262 (-)
FVB/NJ MGP_FVBNJ_G0023620
protein coding gene Chr17:44993414-45000248 (-)
LP/J MGP_LPJ_G0023734
protein coding gene Chr17:48425267-48433413 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023649
protein coding gene Chr17:51133462-51141810 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024275
protein coding gene Chr17:47299219-47305568 (-)
PWK/PhJ MGP_PWKPhJ_G0022777
protein coding gene Chr17:44708831-44717495 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022592
protein coding gene Chr17:44165370-44175408 (-)
WSB/EiJ MGP_WSBEiJ_G0023097
protein coding gene Chr17:47853202-47859257 (-)



Homology
more
  • Human Ortholog
    RRP36, ribosomal RNA processing 36
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RRP36, ribosomal RNA processing 36
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf153, dJ20C7.4
  • Links
    NCBI Gene ID: 88745
    neXtProt AC: NX_Q96EU6
    UniProt: Q96EU6

  • Chr Location
    6p21.1; chr6:43021647-43029599 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 224823 NCBI Gene Model | MGI Sequence Detail 6844 C57BL/6J ±  kb
transcript NM_001368622 RefSeq | MGI Sequence Detail 2565 C57BL/6  
polypeptide Q3UFY0 UniProt | EBI | MGI Sequence Detail 244 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory