About   Help   FAQ
Muc20 Gene Detail
Summary
  • Symbol
    Muc20
  • Name
    mucin 20
  • Synonyms
    MGC:31081
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385039
    NCBI Gene: 224116
  • Gene Overview
    MyGene.info: MUC20
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:32777419-32797435 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 23.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    309 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385039
protein coding gene Chr16:32777419-32797435 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022745
protein coding gene Chr16:30891459-30913479 (-)
A/J MGP_AJ_G0022710
protein coding gene Chr16:29413685-29433568 (-)
AKR/J MGP_AKRJ_G0022683
protein coding gene Chr16:30480988-30500999 (-)
BALB/cJ MGP_BALBcJ_G0022712
protein coding gene Chr16:29557109-29576988 (-)
C3H/HeJ MGP_C3HHeJ_G0022477
protein coding gene Chr16:30599669-30619643 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023161
protein coding gene Chr16:31553812-31574661 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020679
protein coding gene Chr16:29786854-29807331 (-)
CAST/EiJ MGP_CASTEiJ_G0022005
protein coding gene Chr16:30745273-30768300 (-)
CBA/J MGP_CBAJ_G0022447
protein coding gene Chr16:32821286-32841575 (-)
DBA/2J MGP_DBA2J_G0022580
protein coding gene Chr16:29260450-29280844 (-)
FVB/NJ MGP_FVBNJ_G0022555
protein coding gene Chr16:29248198-29268092 (-)
LP/J MGP_LPJ_G0022647
protein coding gene Chr16:30656959-30680057 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022574
protein coding gene Chr16:32227153-32250017 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023173
protein coding gene Chr16:30458018-30478186 (-)
PWK/PhJ MGP_PWKPhJ_G0021744
protein coding gene Chr16:29596757-29626391 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021575
protein coding gene Chr16:30260244-30280459 (-)
WSB/EiJ MGP_WSBEiJ_G0022049
protein coding gene Chr16:30421052-30442140 (-)



Homology
more
  • Human Ortholog
    MUC20, mucin 20, cell surface associated
  • Vertebrate Orthologs
    6
  • Human Ortholog
    MUC20, mucin 20, cell surface associated
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MUC-20
  • Links
    NCBI Gene ID: 200958
    neXtProt AC: NX_Q8N307
    UniProt: Q8N307

  • Chr Location
    3q29; chr3:195720882-195733553 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 224116 NCBI Gene Model | MGI Sequence Detail 20017 C57BL/6J ±  kb
transcript NM_001145874 RefSeq | MGI Sequence Detail 3673 C57BL/6  
polypeptide Q8BUE7 UniProt | EBI | MGI Sequence Detail 656 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR034551 Mucin-20
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory