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Krt79 Gene Detail
Summary
  • Symbol
    Krt79
  • Name
    keratin 79
  • Synonyms
    MGC:36907
  • Feature Type
    protein coding gene
  • IDs
    MGI:2385030
    NCBI Gene: 223917
  • Gene Overview
    MyGene.info: KRT79
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:101929332-101940324 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 57.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2385030
protein coding gene Chr15:101929332-101940324 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022393
protein coding gene Chr15:104062424-104073415 (-)
A/J MGP_AJ_G0022356
protein coding gene Chr15:99979616-99990596 (-)
AKR/J MGP_AKRJ_G0022331
protein coding gene Chr15:103004269-103015261 (-)
BALB/cJ MGP_BALBcJ_G0022359
protein coding gene Chr15:100029532-100040513 (-)
C3H/HeJ MGP_C3HHeJ_G0022126
protein coding gene Chr15:103071807-103082773 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022808
protein coding gene Chr15:107932077-107943045 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020331
protein coding gene Chr15:95764851-95775947 (-)
CAST/EiJ MGP_CASTEiJ_G0021652
protein coding gene Chr15:103929209-103941926 (-)
CBA/J MGP_CBAJ_G0022095
protein coding gene Chr15:111690144-111704942 (-)
DBA/2J MGP_DBA2J_G0022226
protein coding gene Chr15:99268988-99280269 (-)
FVB/NJ MGP_FVBNJ_G0022202
protein coding gene Chr15:98326835-98337865 (-)
LP/J MGP_LPJ_G0022295
protein coding gene Chr15:104217173-104228132 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022224
protein coding gene Chr15:115310809-115321774 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022820
protein coding gene Chr15:103029767-103040752 (-)
PWK/PhJ MGP_PWKPhJ_G0021392
protein coding gene Chr15:99416532-99428244 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021224
protein coding gene Chr15:102861974-102874106 (-)
WSB/EiJ MGP_WSBEiJ_G0021702
protein coding gene Chr15:103652416-103665488 (-)



Homology
more
  • Human Ortholog
    KRT79, keratin 79
  • Vertebrate Orthologs
    8
  • Human Ortholog
    KRT79, keratin 79
    Orthology source: HomoloGene, HGNC
  • Synonyms
    K6L, KRT6L
  • Links
    NCBI Gene ID: 338785
    neXtProt AC: NX_Q5XKE5
    UniProt: Q5XKE5

  • Chr Location
    12q13.13; chr12:52821447-52834293 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    28 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 223917 NCBI Gene Model | MGI Sequence Detail 10993 C57BL/6J ±  kb
transcript NM_146063 RefSeq | MGI Sequence Detail 2113 FVB/N  
polypeptide Q8VED5 UniProt | EBI | MGI Sequence Detail 531 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 3
References
more
  • Summaries
    All 53
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 3
    Phenotypes 28
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:251824 Mesler AL, et al., Hair Follicle Terminal Differentiation Is Orchestrated by Distinct Early and Late Matrix Progenitors. Cell Rep. 2017 Apr 25;19(4):809-821

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory