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Paip1
Gene Detail
Symbol

Name
ID
Paip1
polyadenylate binding protein-interacting protein 1
MGI:2384993
Feature Type
protein coding gene
Genetic Map
Chromosome 13
67.22 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:119428601-119458218 bp, + strand
From VEGA annotation of GRCm38

  29618 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4709  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PAIP1
Gene Tree: Paip1

Human
homologs
PAIP1, poly(A) binding protein interacting protein 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 10605
neXtProt AC: NX_Q9H074

Human Chr (Location): 5p12; chr5:43526267-43557419 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(28) : Gene trapped(27) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Paip1 interacts with 277 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process positive regulation of translation, regulation of translation
Component cytoplasm
Function protein binding, RNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase paip1    NEW 
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(8)
Other database
links
VEGA Gene Model OTTMUSG00000023167 (Evidence)
Ensembl Gene Model ENSMUSG00000025451 (Evidence)
Entrez Gene 218693 (Evidence)
DFCI TC1584473, TC1653845, TC1678522
DoTS DT.101316105, DT.101366476, DT.532074
NIA Mouse Gene Index U015284
Consensus CDS Project CCDS26796.1, CCDS36791.1
International Mouse Phenotyping Consortium Status Paip1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023167 VEGA Gene Model | MGI Sequence Detail 29618 C57BL/6J ±  kb
transcript OTTMUST00000056020 VEGA | MGI Sequence Detail 1731 Not Applicable 
polypeptide OTTMUSP00000026881 VEGA | MGI Sequence Detail 484 Not Applicable 

For the selected sequences
All sequences(81) RefSeq(14) UniProt(7)
Polymorphisms
SNPs within 2kb(275 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016024 Armadillo-type fold
InterPro IPR009818 Ataxin-2, C-terminal
InterPro IPR003890 MIF4G-like, type 3
InterPro IPR016021 MIF4-like, type 1/2/3
Protein Ontology PR:000012236 polyadenylate-binding protein-interacting protein 1
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:193640 Lo JC, et al., RAB-like 2 has an essential role in male fertility, sperm intra-flagellar transport, and tail assembly. PLoS Genet. 2012;8(10):e1002969
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory