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Paip1 Gene Detail
Summary
  • Symbol
    Paip1
  • Name
    polyadenylate binding protein-interacting protein 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384993
    NCBI Gene: 218693
  • Gene Overview
    MyGene.info: PAIP1
Location & Maps
more
  • Sequence Map
    Chr13:119428601-119458218 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      29618 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 67.22 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PAIP1, poly(A) binding protein interacting protein 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PAIP1, poly(A) binding protein interacting protein 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 10605
    neXtProt AC: NX_Q9H074

  • Chr Location
    5p12; chr5:43526267-43557419 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 4709
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: PAIP1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    28
  • Gene trapped
    27
  • Targeted
    1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023167 VEGA Gene Model | MGI Sequence Detail 29618 C57BL/6J ±  kb
transcript OTTMUST00000056020 VEGA | MGI Sequence Detail 1731 Not Applicable  
polypeptide OTTMUSP00000026881 VEGA | MGI Sequence Detail 484 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    274 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 8
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
  • Latest
    J:193640 Lo JC, et al., RAB-like 2 has an essential role in male fertility, sperm intra-flagellar transport, and tail assembly. PLoS Genet. 2012;8(10):e1002969

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory