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Tmem5
Gene Detail
Symbol

Name
ID
Tmem5
transmembrane protein 5
MGI:2384919
Synonyms
6330415D21Rik, MGC:28135
Feature Type
protein coding gene
Genetic Map
Chromosome 10
70.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:122078114-122097371 bp, - strand
From VEGA annotation of GRCm38

  19258 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8600  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Tmem5

Human
homologs
Human Homolog TMEM5, transmembrane protein 5
NCBI Gene ID 10329
neXtProt AC  NX_Q9Y2B1
Human Synonyms  HP10481, MDDGA10
Human Chr (Location)  12q14.2; chr12:63779803-63809558 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human TMEM5
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tmem5 interacts with 330 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000027721 (Evidence)
Ensembl Gene ModelENSMUSG00000034620 (Evidence)
Entrez Gene216395 (Evidence)
Consensus CDS ProjectCCDS24214.1
International Mouse Knockout Project StatusTmem5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027721 VEGA Gene Model | MGI Sequence Detail 19258 C57BL/6J ±  kb
transcript OTTMUST00000068598 VEGA | MGI Sequence Detail 4793 Not Applicable 
polypeptide OTTMUSP00000034721 VEGA | MGI Sequence Detail 444 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(212 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000032631 transmembrane protein 5
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:1913925

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory