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Tmem5
Gene Detail
Symbol

Name
ID
Tmem5
transmembrane protein 5
MGI:2384919
Synonyms
6330415D21Rik, MGC:28135
Feature Type
protein coding gene
Genetic Map
Chromosome 10
70.25 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:122078114-122097371 bp, - strand
From VEGA annotation of GRCm38

  19258 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8600  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TMEM5
Gene Tree: Tmem5

Human
homologs
TMEM5, transmembrane protein 5
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 10329
neXtProt AC: NX_Q9Y2B1

Human Synonyms: HP10481, MDDGA10

Human Chr (Location): 12q14.2; chr12:63779803-63809558 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TMEM5

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Tmem5 interacts with 330 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process protein O-linked mannosylation
Component Golgi apparatus, integral component of membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tmem5    NEW 
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000027721 (Evidence)
Ensembl Gene Model ENSMUSG00000034620 (Evidence)
Entrez Gene 216395 (Evidence)
Consensus CDS Project CCDS24214.1
International Mouse Phenotyping Consortium Status Tmem5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027721 VEGA Gene Model | MGI Sequence Detail 19258 C57BL/6J ±  kb
transcript OTTMUST00000068598 VEGA | MGI Sequence Detail 4793 Not Applicable 
polypeptide OTTMUSP00000034721 VEGA | MGI Sequence Detail 444 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(212 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000032631 transmembrane protein 5
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)
Other
accession IDs
MGI:1913925

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory