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Ube2d1 Gene Detail
Summary
  • Symbol
    Ube2d1
  • Name
    ubiquitin-conjugating enzyme E2D 1
  • Synonyms
    MGC:28550, UBCH5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2384911
    NCBI Gene: 216080
  • Gene Overview
    MyGene.info: UBE2D1
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:71254980-71285262 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 36.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2384911
protein coding gene Chr10:71254980-71285262 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017343
protein coding gene Chr10:71241362-71271683 (-)
A/J MGP_AJ_G0017320
protein coding gene Chr10:68791054-68821422 (-)
AKR/J MGP_AKRJ_G0017281
protein coding gene Chr10:70677153-70710499 (-)
BALB/cJ MGP_BALBcJ_G0017280
protein coding gene Chr10:68993969-69024548 (-)
C3H/HeJ MGP_C3HHeJ_G0017104
protein coding gene Chr10:70680313-70711563 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017738
protein coding gene Chr10:73774644-73804947 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015428
protein coding gene Chr10:65363806-65394147 (-)
CAST/EiJ MGP_CASTEiJ_G0016674
protein coding gene Chr10:70837472-70869094 (-)
CBA/J MGP_CBAJ_G0017076
protein coding gene Chr10:76649655-76686111 (-)
DBA/2J MGP_DBA2J_G0017181
protein coding gene Chr10:68148474-68177873 (-)
FVB/NJ MGP_FVBNJ_G0017174
protein coding gene Chr10:67315304-67346384 (-)
LP/J MGP_LPJ_G0017254
protein coding gene Chr10:71677946-71710054 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017202
protein coding gene Chr10:78703299-78739104 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017777
protein coding gene Chr10:70641978-70672814 (-)
PWK/PhJ MGP_PWKPhJ_G0016458
protein coding gene Chr10:68005404-68036491 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016241
protein coding gene Chr10:70005863-70036126 (-)
WSB/EiJ MGP_WSBEiJ_G0016738
protein coding gene Chr10:70590667-70625502 (-)



Homology
more
  • Human Ortholog
    UBE2D1, ubiquitin conjugating enzyme E2 D1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    UBE2D1, ubiquitin conjugating enzyme E2 D1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A
  • Links
    NCBI Gene ID: 7321
    neXtProt AC: NX_P51668
    UniProt: P51668

  • Chr Location
    10q21.1; chr10:58334979-58370753 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 216080 NCBI Gene Model | MGI Sequence Detail 30283 C57BL/6J ±  kb
transcript NM_145420 RefSeq | MGI Sequence Detail 1448 C57BL/6  
polypeptide P61080 UniProt | EBI | MGI Sequence Detail 147 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 52
    cDNA 52

    Microarray probesets 3
References
more
  • Summaries
    All 48
    Developmental Gene Expression 1
    Gene Ontology 11
    Phenotypes 13
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:243470 Xiao Y, et al., Protein Tyrosine Phosphatase SHP-1 Modulates T Cell Responses by Controlling Cbl-b Degradation. J Immunol. 2015 Nov 01;195(9):4218-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory